Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi674g00005 ATGCATGCTTTGCTAAGTAATCTGGGAAGAGAAATTGTCCGTCCAAAGTCAGATGAAAATCGTCGATGGATCTACGACGTGTTCCTGAGCTTCAGAGGGGAAGACACTCGTTCCGGCTTCATTTCTCATCTCCATAATGACCTCTCAAGATGTGGAATCCACACTTACATCGATAACAACCTTGAGAAGGGAACGGAGTTGGGACCTGAACTATTGCGAGCAATAGAAGGGTCTCATATATGTATTGTTGTTTTCTCCGAAAACTATGCAGATTCTAGTTGGTGCCTTAAGGAGCTGACAAAAATAATGGAATGCTGCCAAGTAAGTTATGACCAGAGGGTTTTGCCCATATTTTACGGTGTTGACCCATCTGATGTACGTAAACAGACTGGTGCTTTTGGAAAAGCCTTTGAAAAATTTTCAGACAGATATTATTCACAGGAAGTGTTGTCCAGTTGGAAGAGTGCACTCACCCAAGCTGCAAATGTGTCTGGTTGGGATATGAGGAATTGCAGGAGTGAAGCTGAACAAGTGGTAAGAATTGTTCGTGATGTTTTAAGAAGACTAAACAACACATTTTTATCCATTACCGATTTTCCAGTTGGCTTAGAATCCCATGTGAAAAAAGTGATTGGGTTTATCGAAAACCAATCAAGCAAAGTTTGTATGGTAGGGATCTGGGGTATAGGTGGATCGGGTAAAACAACCACAGCCAAAGCCATTTACAATGAAATTCATCGCAGGTTTGTGGACAGAAGTTTCATTGAAAATATTAGAGAAGTTTGTGAACAAGATAGTAGAGGGAAAATTGATTTACAAGAACAACTTCTTTTAGATGTCCTTAGAACAGAGGTGAATATCCATAGCATTGCAATGGGAACAACTATAATCAAAAAAAGACTTTGTGGAAAAAGGGTACTTGTTGTGTTTGATGATGTGTCTAAGTTGGGGCAGTTAAAGGCCCTATGTGGAAATCGTGAACTGTTTGGTGAAGGAAGTGTAATAATCATTACAACTAGAGATATACGCCTCCTTACAGAACTTGAGGTCGACTGCGTTTATGAAATGGAGAAAATGAATGAAAATGAGTCCCTTGAGCTCTTTAGTTGGCATGCTTTTAGGGAAGCAAGACCAAGAGAAGACTTGATTGAACTCTCACAAAGTATAGTTGCTTACTGTGGGGGACTACCACTTGCTCTCGCAGTCCTTGGATCTTTCTTACATGACAGGACAAAAAAACAATGGGAAAGTGTATTATCAAAACTAAAAATAATTCCCAATGAACAAGTTCAAAAGAAACTAAGAATAAGCTTTGATGGTTTGGAAGATCAGATGGAAAGGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAAGACAGAGTCTATGTTACTGAGATACTGAATGGCTGTGAACTTCATGCTGATATTGGAATAACAGTGTTGATAGAAAGGTGCCTCGTAAAAGTTGAAAAGAATAACAAGCTCGGAATGCATGATTTGCTACGTAATATGGGAAGAGAAATTGTCCGTCAAAGTTCACCAGAGGAACCTGAGAAGCGTAGTCGATTGTGGGTTCATAAGGAAGTACTTGACGTGTTAATGGAACATACTGGAACAAAGGCTATTCAGGGATTGGCTTTCAAGTTGCAAGGAACTAATACAGATTGCTTCGATACCAAAGCATTTGAGAAAATGAAGAGACTGAGACTTCTGCATCTTGATTGTGTAAAACTTGATGGAGATTATGAGTATCTTCCCAAGCACCTGAGATGGGTCTATTGGCAGGGATTTCCTTTAAAATACATACCTGACATTTTTTCTCTGGAAAAAGTAGTTGCTATTAGCTTAAAACATAGTAATCTAAAACTAGTATGGAAGGAGCCCCAGTTGCTGGAGAGGTTGAAATTCCTCAATCTCAGTCATTCCACGGACTTGACAAACACCCCTGACTTTTCAAAACTTCCGAATCTAGAAAAGCTCATTCTCAAGGACTGTCCAAGTTTGTCCGAGGTACACCAATCCATTGGAGATCTAAGTAAACTTCTTCTGCTAAATTTGAAGGACTGTACAAGCCTTAGCAATCTCCCAAAAAGGATCTATGAGTTGAAATCTGTGAAAATTCTGATCATTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGATGATATAGAGCAAATGGAATCCTTGACAACTCTAATTGCAAAAGATACAGCTGTAGAAGAATTTCCCCGTATAATAGTAAGATTGAAAAGCATTGCATATATATCCCTATGTGGATATGAAGGATTATCACGGGATATTTTTCCTTCTCTCATATGGTCTTGGATGTCACCAACAAAGGGGATTTCCCCATTCAGGGGCATGTCATCTTCTCTAATTTCCATTGAAGCGCAGGACAATAATTTGGGATATCTATCATCAATGCTTCTGAATCTTTCCAAGCTTCGAGGTGTTTTGGTGCAATGCAGCTCCGAGTTTCAATTGACTCAAGAATTAAAAAGAATCCTAAATTTTACTGAATCGAACACATCATCATCATCTGCGTCACAAATTTCAGATCTTTCATTGAGATCGCTTTCGATTGGAATGGGAAGTTACTCCATGGTCATCGATATTCTTAAGGAGAGCATATCACAGGGATTGACAAACAATGCTTCCAATGATTTTTTCCTTCCGGGTGATAATTGTCCTAATTGGCTAGCTTATACCAATGAAGGACATTCAGTGTTTTTTCAAGTGCCTGCGGATAGTGATTTTCACATGAAGGGTATGATTTTATATGTTGTTTATTCATCAAACCCTGAAAACATGGCAGTTGAAAGTGTTGTAAGTGTCTTAATCATTAATTACACAAAGTGCACCATCCTGATATACAAGGGAGACACTGCAATGTCTTTTAATGATGAAGATTGGGAGGGGTTAATATCAAATCTAGGAGCAGGTGACAATATTGAGATTTTTGTAGCATTTGAGAATGGAATGATTGTTAAGGAGACATATATCTATCTGACATGTGGCCAGTCAATTATTGTGGAAATGGAGCCATCACCTGAATTGAACGTGCAACCATCATCTAATGTGAAAGTGGAGCCATCACCGAAGCCTAATGAAAATATCTTCACAATACTTATCAAGAGAATGGGAGAATGTTTAGGCTTGAACTGGAACTGA 3177 0.3859 MHALLSNLGREIVRPKSDENRRWIYDVFLSFRGEDTRSGFISHLHNDLSRCGIHTYIDNNLEKGTELGPELLRAIEGSHICIVVFSENYADSSWCLKELTKIMECCQVSYDQRVLPIFYGVDPSDVRKQTGAFGKAFEKFSDRYYSQEVLSSWKSALTQAANVSGWDMRNCRSEAEQVVRIVRDVLRRLNNTFLSITDFPVGLESHVKKVIGFIENQSSKVCMVGIWGIGGSGKTTTAKAIYNEIHRRFVDRSFIENIREVCEQDSRGKIDLQEQLLLDVLRTEVNIHSIAMGTTIIKKRLCGKRVLVVFDDVSKLGQLKALCGNRELFGEGSVIIITTRDIRLLTELEVDCVYEMEKMNENESLELFSWHAFREARPREDLIELSQSIVAYCGGLPLALAVLGSFLHDRTKKQWESVLSKLKIIPNEQVQKKLRISFDGLEDQMERDIFLDICCFFIGKDRVYVTEILNGCELHADIGITVLIERCLVKVEKNNKLGMHDLLRNMGREIVRQSSPEEPEKRSRLWVHKEVLDVLMEHTGTKAIQGLAFKLQGTNTDCFDTKAFEKMKRLRLLHLDCVKLDGDYEYLPKHLRWVYWQGFPLKYIPDIFSLEKVVAISLKHSNLKLVWKEPQLLERLKFLNLSHSTDLTNTPDFSKLPNLEKLILKDCPSLSEVHQSIGDLSKLLLLNLKDCTSLSNLPKRIYELKSVKILIISGCSKIDKLEDDIEQMESLTTLIAKDTAVEEFPRIIVRLKSIAYISLCGYEGLSRDIFPSLIWSWMSPTKGISPFRGMSSSLISIEAQDNNLGYLSSMLLNLSKLRGVLVQCSSEFQLTQELKRILNFTESNTSSSSASQISDLSLRSLSIGMGSYSMVIDILKESISQGLTNNASNDFFLPGDNCPNWLAYTNEGHSVFFQVPADSDFHMKGMILYVVYSSNPENMAVESVVSVLIINYTKCTILIYKGDTAMSFNDEDWEGLISNLGAGDNIEIFVAFENGMIVKETYIYLTCGQSIIVEMEPSPELNVQPSSNVKVEPSPKPNENIFTILIKRMGECLGLNWN 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi674g00005 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 453 IPR027417 -
Gabi674g00005 1058 Gene3D - 358 442 IPR042197 -
Gabi674g00005 1058 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 166 IPR035897 -
Gabi674g00005 1058 Gene3D - 22 187 IPR035897 -
Gabi674g00005 1058 Pfam TIR domain 25 198 IPR000157 GO:0007165
Gabi674g00005 1058 SMART till_3 24 163 IPR000157 GO:0007165
Gabi674g00005 1058 SUPERFAMILY L domain-like 499 820 - -
Gabi674g00005 1058 Gene3D Ribonuclease Inhibitor 540 882 IPR032675 -
Gabi674g00005 1058 Gene3D - 188 353 IPR027417 -
Gabi674g00005 1058 ProSiteProfiles TIR domain profile. 23 189 IPR000157 GO:0007165
Gabi674g00005 1058 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 191 - -
Gabi674g00005 1058 Pfam NB-ARC domain 204 432 IPR002182 GO:0043531
Gabi674g00005 1058 PRINTS Disease resistance protein signature 223 238 - -
Gabi674g00005 1058 PRINTS Disease resistance protein signature 300 314 - -
Gabi674g00005 1058 PRINTS Disease resistance protein signature 678 694 - -
Gabi674g00005 1058 PRINTS Disease resistance protein signature 393 407 - -
Gabi674g00005 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 750 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi674g00005 Gabi-Chr674 118451 123797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi674g00005 25 751 WRKY Transcription Factor Family AT4G12020 31.544 4.14e-86 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi674g00005 - - gmx:100813173 1266.52