Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi674g00003 ATGTTGACACTGAAAGGAGGGAGCAGGCCACCATGGGTGGGATTGGGAGCAGCAGTGTGGGTTCAGATTGCTTCAGGGAACACCTTCACTTTCCCACTTTACTCTCACTCTTTGAAATCCGTTCTGGGTTTCAACCAGAGACAGGTAACACTCCTCGGTGTCGCTAACGATATTGGCGAGAATGTTGGCTTGCTTCCTGGTATTGCCTGCAACAAGTTCTCACCTTGGGTCATTCTTTTGATCGGTTCTTTAGCCTCTTTTATTGGCTACGGTATTCTCTGGCTCGCTATCAGTGAAACCCTCCAATCTCTTCCTTACTTGTTGCTTTGGTTTGCTCTAGTTATTGCTGCCAACAGTAGTGCATGGTTAACCACTGCTGTTCTTGTAACCAACATGAGAAATTTCCCTGCTAGTAGGGGCACAGTCGCAGGAATCCTGAAAGGTTATGGGGGGCTTAGTGCTGCAGTTTTTACTGAAATTTACAGCATAGTGCTTCATAATTCTTCTTCTAAGTTCCTATTGTTGCTTGCCATTGGTATTCCTGTTGTTTGCTTCAGTATGATGTTTCTTGTTAGGCCTTGTACCCCAGCTTCCGGTGAAGACTCTACAGAAAATTGCCATTTTCTATTCATCCAAGGTTCTAGTGTGGTCCTGGGTGTCTATCTTCTTGCAACTACAATATTTGGTAATGTTTTTCCAATAAATGGAACTGTTTCCTATGTTTTGGTGGCTGTGATGATTCTTCTTCTAATGGCACCACTTGCTATCCCTGCAAAGATGACACTGTTTCCTAGGAGAGCTTCCAATTCAGACTCACCTGAGCTACAATGTGGATCTTCTGACTCTCTCATCCAAGACAAAAAAGATAAAACACAGCCACTGCTAGCATCTTCGTCAACAGGAAACCTTGGAAGTTTTAATGATCAGGATGATTCATCTGAGGTGGCTATGCTTCTTGCTTTGGGTGAGGGAGCTGTAAAGCAGAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCAATAGTAAAGGCTGATTTCTGGTTGCTATGTTTTGTTTATTTTGTTGGTGTTGGCACTGGAGTTACTGTTCTCAACAATCTAGCCCAAATAGGTATTGCACAAGGTGAGGAAGATACCACAACCTTACTGGGAATTTTCAGTTTTTGCAATTTTGTGGGCCGGCTCGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGGACGAAAACGATCCCAAGGACAGTCGGGATGACATGCACACAGACAATTATGGTCATCGTATACCTTCTGTTTGCCTTTGCTGTCAATGGAACCCTTTATATTGCAGTTGCATTACTTGGTGTCTGTTATGGTGTGCAAATTTCCACAATGCTCCCCACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGCGTATTGAGCAACTTCGTGGCTTTGGGAAATCCACTTGGTGCAACCCTTTTCTCAGCTCTGCTAGCAGGTTATATATATGATAATGAGGCAGCAAAACAACATGCTTCTGGTGCTTCATGCGTAGGTGCAGATTGCTTTAAACTGACATTTTTCATTCTTGCTGGTGTGTGTGCTGCGGGCATCATCTTGAGTGTTATCTTGACTTTGAGAATTAAGCCCGTTTACCAAATGCTTTATTCTGGAGGTTCTTTCAAGCTGCCTCAAGCCTCTTCAAGTCACTAA 1704 0.4349 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNKFSPWVILLIGSLASFIGYGILWLAISETLQSLPYLLLWFALVIAANSSAWLTTAVLVTNMRNFPASRGTVAGILKGYGGLSAAVFTEIYSIVLHNSSSKFLLLLAIGIPVVCFSMMFLVRPCTPASGEDSTENCHFLFIQGSSVVLGVYLLATTIFGNVFPINGTVSYVLVAVMILLLMAPLAIPAKMTLFPRRASNSDSPELQCGSSDSLIQDKKDKTQPLLASSSTGNLGSFNDQDDSSEVAMLLALGEGAVKQKKRRPKRGEDFKFTEAIVKADFWLLCFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLGIFSFCNFVGRLGGGVVSEYFVRTKTIPRTVGMTCTQTIMVIVYLLFAFAVNGTLYIAVALLGVCYGVQISTMLPTVSELFGLKHFGVLSNFVALGNPLGATLFSALLAGYIYDNEAAKQHASGASCVGADCFKLTFFILAGVCAAGIILSVILTLRIKPVYQMLYSGGSFKLPQASSSH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi674g00003 567 SUPERFAMILY MFS general substrate transporter 15 195 IPR036259 -
Gabi674g00003 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 550 - -
Gabi674g00003 567 Gene3D MFS general substrate transporter like domains 346 550 IPR036259 -
Gabi674g00003 567 CDD MFS_Mch1p_like 10 535 - -
Gabi674g00003 567 Gene3D MFS general substrate transporter like domains 12 205 IPR036259 -
Gabi674g00003 567 Pfam Nodulin-like 11 257 IPR010658 -
Gabi674g00003 567 SUPERFAMILY MFS general substrate transporter 230 547 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi674g00003 Gabi-Chr674 37904 41170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi674g00003 2 567 Nodulin-like Gene Family AT1G80530 56.614 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi674g00003 - - gmx:100794012 919.072