Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi671g00007 ATGGCCCCATCTGCTGGAGCTGTAGCTTTACATTCTTCTCTTTGCAGCATCCCTCCTGATAAACCATCATCTCCTTCAAAACCAAACACCCTTGTGGCTGCTAAACCCAAAAGCCTCCTTCAAAACCACCCACTTTATGTACCAAACCATGCAAAACTCTCCCTCCAATTCAAAGAGAAAGTCCTCTGCCTTGAGATAATGGGTGTTGATGCAGGTAAAGCACTGTCCCAAAACCCTGACCTACGCACAGCTACCATGGAATCCATTCATTCCATTATCTACTTCCTTCTTTCCAAAGGCATCCAGGAGAAGGACTTGCCCAGGATCTTTGGCATGTGCCCCAAGATTCTCACCTCTGACATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTCTTTCAAGATCTCAATGTCCCAGATTATAGCTTTAGGAAGGTTATCAATAAGTGCCCAAGATTTCTTACATCTAGTGTGAAAGACCAGCTTAAGCCAGCTTTGCTTTACCTTAAGAGACTTGGGTTCAAGGATTTGGCAACCTTGGCTTATCAAGATTCTGTTTTGTTGGTATCTAATGTTGAAAGGACCCTCGTCCCTAAGCTGAAATACTTGGTGAATTTGGGATTTTCCAAGGAAGAGGCTAGAAGTATGGTGTTGAGACATCCACCATTGTTTACTTTCAGTATAGAAAATAATTTTCAGCCAAAGTTTGAGTATTTTGCCGGGGAAATGGGGAGAAAATTGGAGGAGTTGAAAGAATTTCCTCAGTACTTCGCTTTTAGTTTGGAGAACAGGATAAAGCCTAGACACATGGAGGTTTTGCAAAGTGGGATCAATTTACCTTTGTCAATGATGCTTAAAAGCACTGATGAAGAATTTGGGGAGCTGATAAAGCAGGTGGGTGGATGA 906 0.4216 MAPSAGAVALHSSLCSIPPDKPSSPSKPNTLVAAKPKSLLQNHPLYVPNHAKLSLQFKEKVLCLEIMGVDAGKALSQNPDLRTATMESIHSIIYFLLSKGIQEKDLPRIFGMCPKILTSDIKTDLNPVFDFLFQDLNVPDYSFRKVINKCPRFLTSSVKDQLKPALLYLKRLGFKDLATLAYQDSVLLVSNVERTLVPKLKYLVNLGFSKEEARSMVLRHPPLFTFSIENNFQPKFEYFAGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVLQSGINLPLSMMLKSTDEEFGELIKQVGG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi671g00007 301 FunFam Transcription termination factor MTEF1, chloroplastic 132 299 - -
Gabi671g00007 301 Gene3D Transcription termination factor 3, mitochondrial 81 299 IPR038538 -
Gabi671g00007 301 PANTHER CGI-12 PROTEIN-RELATED 35 294 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 Pfam mTERF 187 292 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 Pfam mTERF 64 176 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Gabi671g00007 301 SMART mt_12 247 280 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi671g00007 mTERF 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi671g00007 K15031 - gmx:100788221 490.345