Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi668g00009 ATGAACAACACAACTGATTCCTCTGGATTCCTTGGTTCCAATGACATCAATGGCTTTGGCTATGGCATAGGAATTTCAATTGGAATTCTCTTACTCATCACAACCATCACACTCACTTCCTACTTCTGCACAAGGACACAGGCTCCAACTGCTCCAGCTTCAAGGAGAAGCATCCCTATGTTCCTGGAACCACGACATTCAATAGTTGATGTTGGCCTAGATGAAGCAACAATTCTGAGTTATCCAAAGATGCTCTACCCTGAAGCCAAGCTCAGAAAATCTGATTCAACAGCAACATGTTGTTCCATATGTCTAGCAGATTACAAGGCTACTGATATGCTTAGGGTATTGCCTGATTGTGAGCATCTATTCCACCTCAAGTGCATAGACCCTTGGTTGAGGCTTCATCCTTCTTGTCCTGTCTGTAGAACTTCTCCAATCCCAACACCCCTCTCAACACCTCTGGCTGAAGTGGTTCCATTAGCAAGCAGGCGAGATTCTTAG 504 0.4464 MNNTTDSSGFLGSNDINGFGYGIGISIGILLLITTITLTSYFCTRTQAPTAPASRRSIPMFLEPRHSIVDVGLDEATILSYPKMLYPEAKLRKSDSTATCCSICLADYKATDMLRVLPDCEHLFHLKCIDPWLRLHPSCPVCRTSPIPTPLSTPLAEVVPLASRRDS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi668g00009 167 Pfam Ring finger domain 101 143 IPR001841 -
Gabi668g00009 167 SUPERFAMILY RING/U-box 81 148 - -
Gabi668g00009 167 CDD RING-H2_EL5-like 100 143 - -
Gabi668g00009 167 SMART ring_2 101 142 IPR001841 -
Gabi668g00009 167 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Gabi668g00009 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 157 IPR045899 -
Gabi668g00009 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 147 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi668g00009 Gabi-Chr668 90502 91005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi668g00009 6 163 C3H Transcription Factor Family AT2G35910 63.580 1.29e-58 180