Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi668g00007 ATGGCGATGCAAACTGTTTATCTAAAAGAACATGAAGGAATTGTCCACAATTCTGTTGGACAGTTGTCATCTGCAACTTCAGCACCATGGTGGAGTGCTTTTGGGTCTCAATCAGTTTATGGAGAATCTTGTGGCCAAATGAAACCCTTTTCATTGGAGCTTTCCAATTTTGTAGACCAATTTGCTACAAGTAAGCAATCAGTACGAGGAGTTGAACAATTGTTGGATAAAGGACATACAACCCAATTTACCATCTTTCCAGATGATTGTAAAATGTCAGGTGATGCACAGAAAACTCAGGCCTTATCACTGCAGTCATCTCTTGCTGAGCCCCACAATCGTTTTGAGCTAGGGTTTAATCAGCCTATGATCTATGCAAAATATCCTTACATGGATCAATTTTATGGGCTCTTCTCAACTTATGGACCTCAAATTTCGGGACGTATAATGCTTCCACTTAACTTGACATCCGATGATGGACCAACTTATGTAAATGCTAAGCAGTACCATGGAATCATCAGACGCCGGCAATCCCGAGCAAAAGCTGTACTTGAGAAAAAATTGACAAGACGTCGCAAGCCATATATGCATGAATCACGCCATCTACATGCAATGAGGAGACCAAGAGGAAACGGTGGCCGATTCTTGAACACAAAAACTTCTACTAATGGAAATGGTAAAAGTGGAATTGGAAGTGAAGTGAACAAAACTGGTGGCCAAAAATTGCAGTCTAGTGGCTCTCAGAGTTCTGAAGTCCTGCAATCTGAGGTTGGAACTTTAAACACATCAAAGGATACAAATGGAAGCAGTTCAAATATCTCAGGGTCAGAGGTGACAAGCATGTATTCAAGGGAAACTCTTGATAGCTTTGCTATCAATCATCTTGGATCTTCTGTGCACACTCTGGCAGATATGATAGGTACCATGCCTACAAATTGGGTTGCAGCAGCAGGAAACTGCTGTAACCTTAAGATTTGA 978 0.4131 MAMQTVYLKEHEGIVHNSVGQLSSATSAPWWSAFGSQSVYGESCGQMKPFSLELSNFVDQFATSKQSVRGVEQLLDKGHTTQFTIFPDDCKMSGDAQKTQALSLQSSLAEPHNRFELGFNQPMIYAKYPYMDQFYGLFSTYGPQISGRIMLPLNLTSDDGPTYVNAKQYHGIIRRRQSRAKAVLEKKLTRRRKPYMHESRHLHAMRRPRGNGGRFLNTKTSTNGNGKSGIGSEVNKTGGQKLQSSGSQSSEVLQSEVGTLNTSKDTNGSSSNISGSEVTSMYSRETLDSFAINHLGSSVHTLADMIGTMPTNWVAAAGNCCNLKI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi668g00007 325 MobiDBLite consensus disorder prediction 214 277 - -
Gabi668g00007 325 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Gabi668g00007 325 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 47 283 IPR001289 GO:0003700|GO:0006355
Gabi668g00007 325 MobiDBLite consensus disorder prediction 198 277 - -
Gabi668g00007 325 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
Gabi668g00007 325 Gene3D - 158 220 - -
Gabi668g00007 325 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 161 215 IPR001289 GO:0003700|GO:0006355
Gabi668g00007 325 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Gabi668g00007 325 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi668g00007 Gabi-Chr668 18713 23984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi668g00007 1 324 CCAAT-HAP2 Transcription Factor Family AT3G05690 45.614 5.40e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Gabi668g00007 CBFB_NFYA 9.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi668g00007 K08064 - gmx:100794755 518.85