Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi665g00013 ATGGCGTCATCTCTGATCTCAAATCCAACCACCACCTCCACCACTGATATTCGGTCACGTGTGATGAAGAAGAAGAAGAAATCTCAAACGAAACATAACCAACAACAAGAACAGAGCCAAACCAAATGGAAATCGCAGGCGCAGCAACAAATCTACTCCTCCAAGCTCCACAAAGCCTTGGCCAGAGTCAACATCGGAGGCTCCGGCGACGCGCCTCGCCGCGGGAGAGCCGTCCGGGAAGCCGCCGACAGGGTCCTCGCCGTCGCCGCCAGGGGGAGGACACGATGGAGCCGAGCCATACTCACGAACCGGCTCAAGCTCAAGTTCAGGAAGCAGCACAAGAGACAGAGGGTAGTTGGGCCGACCGGGTCCAACAGCCGGTCCAGGAAGCCACGTGTCAGCGTTTTCCGGCTCAAGGGAAAGACCCTCCCAGCGGTTCAGAGGAAAGTAAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTGCCAGTGATTTTGGAAGAAGCTATTGATTACATACCTGCCCTTGAGATGCAGGTTCGAGCCATGTCAGCTCTTGCTGACTTACTCTTTGGCTCTTCTGGTGCCGGTTCGAGCTCCGGTTCGAGCTATTGA 624 0.5593 MASSLISNPTTTSTTDIRSRVMKKKKKSQTKHNQQQEQSQTKWKSQAQQQIYSSKLHKALARVNIGGSGDAPRRGRAVREAADRVLAVAARGRTRWSRAILTNRLKLKFRKQHKRQRVVGPTGSNSRSRKPRVSVFRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALADLLFGSSGAGSSSGSSY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi665g00013 207 CDD bHLH_AtIBH1_like 137 190 IPR044549 GO:0006355
Gabi665g00013 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 45 193 IPR044660 GO:0006355
Gabi665g00013 207 MobiDBLite consensus disorder prediction 111 131 - -
Gabi665g00013 207 MobiDBLite consensus disorder prediction 1 17 - -
Gabi665g00013 207 MobiDBLite consensus disorder prediction 33 51 - -
Gabi665g00013 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 194 IPR036638 GO:0046983
Gabi665g00013 207 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi665g00013 Gabi-Chr665 159676 161684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi665g00013 39 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 59.259 3.49e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi665g00013 - - gmx:100792237 256.144