Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi665g00011 ATGGAGGAGAGACACCCGAACAATTCATCATCATCCACACCCACCACCCCCATGGCATTTTCCGACGAGATTCCGAGCATAAACATGAACACCACCAACTTGACTTTCCCTTTTCAAACCGCTATGTCCACCATCTTTGAAATGATGCCATCCTCCTCGTGTGATCAAAAGGTCTCATCTTTTGGCTTCGTGGACTTGTTGGGTGTTCATGATAACAGCCCTTCTTTATTCGATTGGTTCCCCATAACCGCCGCTGCCACCACCGACACCGCCGCCGCCGTCAACCACCCTCTCCCGTCGCCGGCAAGTTCCAATGTCCCTGACTCCTCCGAGGTGTTGAACACTCCGGCATCACCCAATTCGTCTTCAATTTCATCGTCGTCGAATGAAGCCACAGCAAACAACACCAACGAACAACAGAGTGATAATAATAAACCTGGGAATCAACATGAAGCAGCAGAGGATGATGGTGGAGCTGAAAAAAATGACCAAGATCAAGACAAGACTAAGAAACAGCTGAAACCAAAGAAGAAGAACCCAAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAAAGCGAGGTGGATCACCTTGATGATGGTTATAGATGGCGCAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCCAGGAGCTACTATCGTTGCACCATGGTTGGTTGCGGCGTCAAGAAGCGCGTGGAGCGTTCCTCCGATGACCCTTCGGTCGTTGTCACCACCTATGAGGGCCAGCACACCCACCCGTGCCCCTCCACAATGCGGGCTAGTACCTCACACTTTGTGCTGCCACATCATCATCATCAGTTTCATCAGCAAAATGTGCAACAAGCATCGCCTTTGTCATATAACTCCACTATGAACTCCTCGACGTTTGGTAGCATTGTTCAAGATCATGCCAATCGTCGAGGTTTTGGGTCGGTTCATGAAACTTATTTAAGGGACAACGGGCTGCTTCAGGACATTTTTGTGCCAACACAGATGCCGAAGGAGAGGAATGATTGA 1029 0.4888 MEERHPNNSSSSTPTTPMAFSDEIPSINMNTTNLTFPFQTAMSTIFEMMPSSSCDQKVSSFGFVDLLGVHDNSPSLFDWFPITAAATTDTAAAVNHPLPSPASSNVPDSSEVLNTPASPNSSSISSSSNEATANNTNEQQSDNNKPGNQHEAAEDDGGAEKNDQDQDKTKKQLKPKKKNPKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTMVGCGVKKRVERSSDDPSVVVTTYEGQHTHPCPSTMRASTSHFVLPHHHHQFHQQNVQQASPLSYNSTMNSSTFGSIVQDHANRRGFGSVHETYLRDNGLLQDIFVPTQMPKERND 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi665g00011 342 FunFam WRKY transcription factor 57 185 259 - -
Gabi665g00011 342 Gene3D WRKY domain 184 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi665g00011 342 MobiDBLite consensus disorder prediction 95 190 - -
Gabi665g00011 342 ProSiteProfiles WRKY domain profile. 194 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi665g00011 342 MobiDBLite consensus disorder prediction 95 147 - -
Gabi665g00011 342 MobiDBLite consensus disorder prediction 7 23 - -
Gabi665g00011 342 Pfam WRKY DNA -binding domain 200 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi665g00011 342 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 95 285 IPR044810 GO:0003700
Gabi665g00011 342 SUPERFAMILY WRKY DNA-binding domain 191 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi665g00011 342 MobiDBLite consensus disorder prediction 1 23 - -
Gabi665g00011 342 MobiDBLite consensus disorder prediction 148 172 - -
Gabi665g00011 342 SMART WRKY_cls 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi665g00011 Gabi-Chr665 93819 96523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi665g00011 169 339 WRKY Transcription Factor Family AT2G47260 52.308 1.61e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi665g00011 WRKY 5.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi665g00011 - - gmx:100127422 330.102