Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi655g00016 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCAGATCGTGCATGCAAAACGTGTAACCCATAACGAGCATATACCTACAGTACTGCCTGAACCTCAAATTCATACTCGCTCACTCCAATCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAGCCCGTTAATAAAATCACTAATAATAGAGCACGAGCATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCCTCAATTGAGTATGAGGAACAAGAAGAGTCAAAACATCGAACTGGATCAATGAAGGAACAACGTTCATCTAGTCCACAACCTTTACCGCTTCCATCTCCCCAGGGCGGTGCTGCATTGAAGGCTGTTGGCAGCTTTAAGTTGGGGACATCTACTGGTCCTCTATATGCTTCTGGACCTTTGCCGCTTCCTCCTACTGGGTCACTCCGGAACTTTGTGTATGAGGAAATTGCTGCTGCTTGCCACAATTTCTCTTCAGATCGATGCATGTCAGAATGTCTTTCGTCCACCATATATAAAGCTTCCTTTGGTGATGATGCTTCAAGTTCAAAGAAATTTGAAGCTACTGTCACCCGCCTCCACCCATCATCTCAGGGTTTGAAGGAATTCATAAATGAGGTTAATACTCTTGCATCTTTACAGCATCCAAACCTCTGTAAATTGCTAGGATTCCATGCTCGTGATAATTCGGAACATAGAATGTTGGTTTATGAGAGGCTATATCACGGAAGCTTGGACCGCTTATTGTATGGGAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGACTTACTTTTTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTTTCAACAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTGGGACATATTCCTGAGGAAGAGATTTCGAGCAGTTCATCTGCTGTTGGAAACCTATCAGTGGAGACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAACGTATGGAGCTTTGGAATTTTTCTTCTGGAGCTACTCACAGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAACTTGGTGAAGTGGAGCAGGCCTTTCCTAGCTGATGAGTATCGTCTGTCATTGATAATGGATCCTCAACTCAAAGGTCGTTTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAAAGACCAACAATGAGAACTGTTGTTAAGCATCTCAAAATGATACAGGATTTGAAGTACTCTTGCAGGTTCCCTCTGAAAGAACCAGCATCAATCTCTGGAAAACACATGTCAAGATCACCAAGTCTTAATGGTATCATATGTCCTGCACCTAGGTTGAGTTTCTCTCCATCACCACCATCAGCAGCCCCAGTATCTGTTTCTCCTCCAAGATGGTCTGGAGTGCCAATTGTCCTTCCGCCGCGTGCTTGTTCTTCAACTCTTTCTTTGGAGGAGCTTGATAGGCAAGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGGAGGGCTAGTGTTGAAGGATGTTGA 1641 0.4369 MGCFTVLKSKKKKSDQIVHAKRVTHNEHIPTVLPEPQIHTRSLQSAPPSFRTRVKPIQPVNKITNNRARALSAPSTLDAAEQDALASIEYEEQEESKHRTGSMKEQRSSSPQPLPLPSPQGGAALKAVGSFKLGTSTGPLYASGPLPLPPTGSLRNFVYEEIAAACHNFSSDRCMSECLSSTIYKASFGDDASSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHARDNSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSVETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADEYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLKEPASISGKHMSRSPSLNGIICPAPRLSFSPSPPSAAPVSVSPPRWSGVPIVLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi655g00016 546 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi655g00016 546 PANTHER OS01G0588500 PROTEIN-RELATED 100 448 - -
Gabi655g00016 546 SUPERFAMILY Protein kinase-like (PK-like) 148 453 IPR011009 -
Gabi655g00016 546 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Gabi655g00016 546 Pfam Protein tyrosine and serine/threonine kinase 182 444 IPR001245 GO:0004672|GO:0006468
Gabi655g00016 546 MobiDBLite consensus disorder prediction 521 546 - -
Gabi655g00016 546 MobiDBLite consensus disorder prediction 90 121 - -
Gabi655g00016 546 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Gabi655g00016 546 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi655g00016 Gabi-Chr655 126362 129560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi655g00016 148 448 Receptor kinase-like Gene Family AT4G02010 38.436 1.74e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Gabi655g00016 PK_Tyr_Ser-Thr 2.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi655g00016 - - gmx:100808712 940.643