Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi655g00003 ATGGGTAGTAAAAGGGTAATTGAGGAACTACTCAGAGGGCGTGATTTGGCCAAACAGCTTAAAAGTGTCATCAACAATGGATGTGATGAAAAACTAGCAGCAACAACAACAACAACCCCATTTGCCGAACATCTTGTGAAGGAGGTGCTCATGTCCTTTTCCAATTCACTCTTGTTCTTGAACAATCCCACTTCTCAATCCCATGATATTAATCCCTCTAACTCTGAGGACTCTCAAGAGAGTAACTGCAAAACTTCCACCCTTAAGGAAAAAAGAGGGTGTTACAAAAGAAGAAGAACTTCACAATCGTTGGAGAAGGAATCTGAAACTCCAATTGAAGATGGTCATCAATGGAGGAAGTATGGCCAAAAAGTGATCCTAAATACCAAATATCCAAGGAACTACTACAGATGCACTCACAAATTTGATCAAAGTTGCCAAGCAACAAAACAGGTTCAGAGAATTCAAGATGATCCTCCACTTCACAGGACAACCTATTATGGAAACCACACTTGTAGAAACATGCTAAACCCTGAGATCATACTGGATCCAATTGCTTCTTCTGGCCCTTCTGTATTCCTTAGCTTTGACAACACCCTCCCTAATCCAGCCAAACAAGATTGCCCCTTTCTCTCATCTTCTTTTCCATCATCATCATCAACATCATCATCAGTGAAAAAGGAGTGTAAGGATGAGATTAACCCTCCCTCATCTTCCTCCAATGATTACTTCCTCCCTTCAGAGTTCACTTTTGATAACTCACCAAGTCATGTTATTTCTGATGTCTTATGTGATCCTGCTGAGTTTGATCAAGCCTTTGAGCCCTTTCTTGCATTTAGATGA 843 0.4069 MGSKRVIEELLRGRDLAKQLKSVINNGCDEKLAATTTTTPFAEHLVKEVLMSFSNSLLFLNNPTSQSHDINPSNSEDSQESNCKTSTLKEKRGCYKRRRTSQSLEKESETPIEDGHQWRKYGQKVILNTKYPRNYYRCTHKFDQSCQATKQVQRIQDDPPLHRTTYYGNHTCRNMLNPEIILDPIASSGPSVFLSFDNTLPNPAKQDCPFLSSSFPSSSSTSSSVKKECKDEINPPSSSSNDYFLPSEFTFDNSPSHVISDVLCDPAEFDQAFEPFLAFR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi655g00003 280 MobiDBLite consensus disorder prediction 64 82 - -
Gabi655g00003 280 Gene3D WRKY domain 94 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi655g00003 280 SMART WRKY_cls 112 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi655g00003 280 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 213 IPR044810 GO:0003700
Gabi655g00003 280 MobiDBLite consensus disorder prediction 213 241 - -
Gabi655g00003 280 ProSiteProfiles WRKY domain profile. 107 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi655g00003 280 Pfam WRKY DNA -binding domain 113 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi655g00003 280 SUPERFAMILY WRKY DNA-binding domain 110 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi655g00003 280 MobiDBLite consensus disorder prediction 64 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi655g00003 Gabi-Chr655 31290 33332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi655g00003 5 172 WRKY Transcription Factor Family AT3G56400 39.011 5.74e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi655g00003 WRKY 3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi655g00003 - - gmx:100170682 351.673