Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi655g00002 ATGAGTTCTGATCAGCCACTGCTTTCGGAACCAGATCTTCCAAGAGTGATTCATCACCGCCATCGGAAATCAGGATCCAGAGGCTGTATCTGCGGCAATGCTTCATTCTCATCTTCCGTCTTTGACGATGCTCTATCTCAGATCAGCGACTTTGACGTGAAGGACAGAGACCGTAACGTTGTGTTGGCTAGAGACTGTAGTTTCCACTCTGCATTTGGTAATAGCTCCTCCTCTTTCTCAGCTGATAGGGACTTCCACTCTTCTGAATCGGGGCAGTTTCCTTTGGAATGCCCCACACGCTTGGTATCATCAAGGGGTGCAATGGAACAACTGCGTGATGCAAATAGCCGTAGTGTGCCCTTTGAAATATCTGCAACTGGAACTGGAACTGGAACTGGAACTTCATCTAGAGTGCATGACAGGTTGAATAAATCTCAGAGGATTCGTCACAAAAGTGTGCATTTTGATGATGTTGCTTTACATGAAGATAGTGCTAGGCTTATCTATATCAATGATCCCAAGAAGACAAATGACAAGTATGAGTTCACTGGGAATGAGATCCGAACTAGTAAATACACCATTGTCACCTTCTTGCCCAAGAATCTCTTTATTCAGTTTCATCGGGTTGCTTATTTGTATTTCCTTGCCATCGCCTTTCTCAATCAGCTTCCTCCCCTGGCTGTGTTTGGGAGAACAGTGTCTCTTTTCCCCCTCTTGTTCGTGCTTTGCGTCACCGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCGGACCGTAATGAAAACAACCGAGAGTCTCTGGTTCTTCAATCCGGGGATTTCCGATCGAAGAAGTGGAAAAAAATACAGGCTGGTGAGATTGTTAAGATCTTTGCCGATGAGACAATCCCAGCTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCTTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCCAAGCAGGAAACAGCTTCAGCAGTTTCATCAGAAACTTGTGCTGTTTTTGGGGTTATTAGATGCGAGCAACCTAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGAGTTAAGTGTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCGGGACAGGAAACAAAAGCAATGATGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGATTGGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCAGTTTTTCTTTTTATTATGTGTTTGGTCGTGGCCCTTGGGATGGGTCTTTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGTTACTTCAACAATGGGCCAGATAATGGAAACAAATACAAGTATTATGGGATACCGATGGAAGTGTTTTTCTCCTTTTTGAGTTCTGTTATTGTGTTTCAGATAATGATACCGATATCTCTTTACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATTGAAGACTTGGATATGTATGATGCTAGGTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCGGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTTCGGAGGGCTAGTGTATATGGGAAGAATTATGGGACCTCATTGCTTATGGCTAATAATAATACAGCAGCAGCAACTGTTATTCCTAAACGGAGATGGAAGCTCAAATCTGAAATCGCAGTTGATTCTGAATTGATGACAGTGTTGCAGAAAGACTCAAATAGAGATGAAAGGATTGCTGTTCACGAGTTTTTTCTTACGTTGGCTGCTTGTAATACTGTGATCCCTATACCTAGTGATGGTAGATTTTCCAGTTGTGGAACAAGTGAATCAATTGAAGATATAAAACATATTGACTACCAGGGAGAATCTCCTGATGAGCAAGCTCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCCGGACATATTGTTATTGATGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCCGACAATGTTGTAAAGGTGTTAGTCAAAGGTGCTGATTCTTCAATGTTTAGCATTTTAGCAAATGGCAGTGAGAGCAACGATAGCATACTACATGCAACTCAGAGCCATTTGAGTGAATATTCTTCCGAAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGGATCTTTCAGATGCTGAACTTGAGGAGTGGCAAAGTAGGTATGAAGAGGCAAGCACTTCATTGACTGACAGAGCTACTAAATTGCGTCAAACAGCAGCTCTTATAGAATGCAATTTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTCCAAGATGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACAGGTGATAAGCAAGAGACTGCAATTTCTATTGGTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAACGGATTATTATAAATGGCACTTCAGAGACTGAATGCAGAAATCTTTTGGGTGATGCTAAAGCCAAATATTGTGTGACATCTTCAAGTAGAGGGCATCAGAATCTGAAGCACAAAAGCAATGCTGCACATTGTAATCTTGATATTCCCAATGGCTCAAAGTCATTGAGTTTGCCCAAGTGGAATCCAGGAAAGGAAGAAGAAATTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTAGTGCTATGTTGTCGTGTTGCACCCTTGCAGAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACGGATGATATGACACTGGCCATAGGTGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGTCAAGCAGTGATGGCATCAGATTTTGCTATGGGGCAATTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGTAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACGGCTTTTTCTACAACTTCGGCATTGACGGATTGGAGTAGTGTATTCTATTCTGTGTTATACACATCTGTACCTACTATTATTGTTGGTATTCTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCTAAATTGTATGGTACAGGTCACAGGCAAGAAGCATACAATATGCAATTATTTTGGATCACAATGATTGATACAGTATGGCAGAGCATTGTTCTCTTTTACACACCGTTGTTCACCTATAAGGACAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTATCCTTGTAAATATACACCTGGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTGTATGGGGATCAATAATCATTACATACGGTTGCATGGTGGTATTGGATTCTATACCTGTATTTCCCAATTACTGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATTACAATTTTGCTTATAATAATCGTGGCATTGCTTCCTCGCTTTACTTGCAAAGTTGTTTGTCAAATCTTTTGGCCTTCTGATATCCAGATAGCTAGAGAAGCTGAGTTGGTGAGAAAAGGACATGATCATTTGCAGTCAAGGCAACAAGTTTCCAGTTAA 3912 0.4172 MSSDQPLLSEPDLPRVIHHRHRKSGSRGCICGNASFSSSVFDDALSQISDFDVKDRDRNVVLARDCSFHSAFGNSSSSFSADRDFHSSESGQFPLECPTRLVSSRGAMEQLRDANSRSVPFEISATGTGTGTGTSSRVHDRLNKSQRIRHKSVHFDDVALHEDSARLIYINDPKKTNDKYEFTGNEIRTSKYTIVTFLPKNLFIQFHRVAYLYFLAIAFLNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEIVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETASAVSSETCAVFGVIRCEQPNRNIYEFTANMEFNGVKCSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSAASPSKRSRLESYMNRETLWLSVFLFIMCLVVALGMGLWLVRHKNQLDTLPYYRKSYFNNGPDNGNKYKYYGIPMEVFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDLDMYDARSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKNYGTSLLMANNNTAAATVIPKRRWKLKSEIAVDSELMTVLQKDSNRDERIAVHEFFLTLAACNTVIPIPSDGRFSSCGTSESIEDIKHIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADSSMFSILANGSESNDSILHATQSHLSEYSSEGLRTLVVASRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIECNLKLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQRIIINGTSETECRNLLGDAKAKYCVTSSSRGHQNLKHKSNAAHCNLDIPNGSKSLSLPKWNPGKEEEINAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVLYTSVPTIIVGILDKDLSHRTLLQYPKLYGTGHRQEAYNMQLFWITMIDTVWQSIVLFYTPLFTYKDSSIDIWSMGSLWTIAVVILVNIHLAMDINRWVLITHVAVWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVCQIFWPSDIQIAREAELVRKGHDHLQSRQQVSS 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi655g00002 1303 Gene3D - 668 803 IPR023299 GO:0000166
Gabi655g00002 1303 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 157 1287 - -
Gabi655g00002 1303 SUPERFAMILY Calcium ATPase, transduction domain A 265 408 IPR008250 -
Gabi655g00002 1303 CDD P-type_ATPase_APLT_Dnf-like 184 1169 - -
Gabi655g00002 1303 NCBIfam phospholipid-translocating P-type ATPase 182 1284 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi655g00002 1303 Pfam Phospholipid-translocating P-type ATPase C-terminal 1037 1277 IPR032630 -
Gabi655g00002 1303 SFLD p-type atpase 539 1060 IPR044492 -
Gabi655g00002 1303 Gene3D - 821 1049 IPR023214 -
Gabi655g00002 1303 SUPERFAMILY HAD-like 542 1053 IPR036412 -
Gabi655g00002 1303 Pfam haloacid dehalogenase-like hydrolase 551 867 - -
Gabi655g00002 1303 SUPERFAMILY Calcium ATPase, transmembrane domain M 182 1276 IPR023298 -
Gabi655g00002 1303 Pfam Phospholipid-translocating ATPase N-terminal 168 233 IPR032631 -
Gabi655g00002 1303 Pfam E1-E2 ATPase 266 513 - -
Gabi655g00002 1303 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 561 838 IPR023299 GO:0000166
Gabi655g00002 1303 NCBIfam HAD-IC family P-type ATPase 979 1095 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi655g00002 1303 NCBIfam HAD-IC family P-type ATPase 818 873 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi655g00002 1303 SFLD C1.7: P-type atpase like 539 1060 - -
Gabi655g00002 1303 Gene3D - 241 412 - -
Gabi655g00002 1303 FunFam Phospholipid-transporting ATPase 667 802 - -
Gabi655g00002 1303 FunFam Phospholipid-transporting ATPase 821 1049 - -
Gabi655g00002 1303 ProSitePatterns E1-E2 ATPases phosphorylation site. 557 563 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi655g00002 Gabi-Chr655 21602 29775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi655g00002 145 1286 Primary Pumps ATPases AT5G04930 56.658 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi655g00002 K14802 - gmx:100812459 2179.83