LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi655g00002	ATGAGTTCTGATCAGCCACTGCTTTCGGAACCAGATCTTCCAAGAGTGATTCATCACCGCCATCGGAAATCAGGATCCAGAGGCTGTATCTGCGGCAATGCTTCATTCTCATCTTCCGTCTTTGACGATGCTCTATCTCAGATCAGCGACTTTGACGTGAAGGACAGAGACCGTAACGTTGTGTTGGCTAGAGACTGTAGTTTCCACTCTGCATTTGGTAATAGCTCCTCCTCTTTCTCAGCTGATAGGGACTTCCACTCTTCTGAATCGGGGCAGTTTCCTTTGGAATGCCCCACACGCTTGGTATCATCAAGGGGTGCAATGGAACAACTGCGTGATGCAAATAGCCGTAGTGTGCCCTTTGAAATATCTGCAACTGGAACTGGAACTGGAACTGGAACTTCATCTAGAGTGCATGACAGGTTGAATAAATCTCAGAGGATTCGTCACAAAAGTGTGCATTTTGATGATGTTGCTTTACATGAAGATAGTGCTAGGCTTATCTATATCAATGATCCCAAGAAGACAAATGACAAGTATGAGTTCACTGGGAATGAGATCCGAACTAGTAAATACACCATTGTCACCTTCTTGCCCAAGAATCTCTTTATTCAGTTTCATCGGGTTGCTTATTTGTATTTCCTTGCCATCGCCTTTCTCAATCAGCTTCCTCCCCTGGCTGTGTTTGGGAGAACAGTGTCTCTTTTCCCCCTCTTGTTCGTGCTTTGCGTCACCGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCGGACCGTAATGAAAACAACCGAGAGTCTCTGGTTCTTCAATCCGGGGATTTCCGATCGAAGAAGTGGAAAAAAATACAGGCTGGTGAGATTGTTAAGATCTTTGCCGATGAGACAATCCCAGCTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCTTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCCAAGCAGGAAACAGCTTCAGCAGTTTCATCAGAAACTTGTGCTGTTTTTGGGGTTATTAGATGCGAGCAACCTAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGAGTTAAGTGTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCGGGACAGGAAACAAAAGCAATGATGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGATTGGAAAGTTACATGAACAGAGAAACCCTTTGGTTGTCAGTTTTTCTTTTTATTATGTGTTTGGTCGTGGCCCTTGGGATGGGTCTTTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGTTACTTCAACAATGGGCCAGATAATGGAAACAAATACAAGTATTATGGGATACCGATGGAAGTGTTTTTCTCCTTTTTGAGTTCTGTTATTGTGTTTCAGATAATGATACCGATATCTCTTTACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATTGAAGACTTGGATATGTATGATGCTAGGTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCGGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTTCGGAGGGCTAGTGTATATGGGAAGAATTATGGGACCTCATTGCTTATGGCTAATAATAATACAGCAGCAGCAACTGTTATTCCTAAACGGAGATGGAAGCTCAAATCTGAAATCGCAGTTGATTCTGAATTGATGACAGTGTTGCAGAAAGACTCAAATAGAGATGAAAGGATTGCTGTTCACGAGTTTTTTCTTACGTTGGCTGCTTGTAATACTGTGATCCCTATACCTAGTGATGGTAGATTTTCCAGTTGTGGAACAAGTGAATCAATTGAAGATATAAAACATATTGACTACCAGGGAGAATCTCCTGATGAGCAAGCTCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCCGGACATATTGTTATTGATGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCCGACAATGTTGTAAAGGTGTTAGTCAAAGGTGCTGATTCTTCAATGTTTAGCATTTTAGCAAATGGCAGTGAGAGCAACGATAGCATACTACATGCAACTCAGAGCCATTTGAGTGAATATTCTTCCGAAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGGATCTTTCAGATGCTGAACTTGAGGAGTGGCAAAGTAGGTATGAAGAGGCAAGCACTTCATTGACTGACAGAGCTACTAAATTGCGTCAAACAGCAGCTCTTATAGAATGCAATTTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTCCAAGATGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACAGGTGATAAGCAAGAGACTGCAATTTCTATTGGTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAACGGATTATTATAAATGGCACTTCAGAGACTGAATGCAGAAATCTTTTGGGTGATGCTAAAGCCAAATATTGTGTGACATCTTCAAGTAGAGGGCATCAGAATCTGAAGCACAAAAGCAATGCTGCACATTGTAATCTTGATATTCCCAATGGCTCAAAGTCATTGAGTTTGCCCAAGTGGAATCCAGGAAAGGAAGAAGAAATTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTAGTGCTATGTTGTCGTGTTGCACCCTTGCAGAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACGGATGATATGACACTGGCCATAGGTGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGTCAAGCAGTGATGGCATCAGATTTTGCTATGGGGCAATTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGTAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACGGCTTTTTCTACAACTTCGGCATTGACGGATTGGAGTAGTGTATTCTATTCTGTGTTATACACATCTGTACCTACTATTATTGTTGGTATTCTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCTAAATTGTATGGTACAGGTCACAGGCAAGAAGCATACAATATGCAATTATTTTGGATCACAATGATTGATACAGTATGGCAGAGCATTGTTCTCTTTTACACACCGTTGTTCACCTATAAGGACAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTATCCTTGTAAATATACACCTGGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTGTATGGGGATCAATAATCATTACATACGGTTGCATGGTGGTATTGGATTCTATACCTGTATTTCCCAATTACTGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATTACAATTTTGCTTATAATAATCGTGGCATTGCTTCCTCGCTTTACTTGCAAAGTTGTTTGTCAAATCTTTTGGCCTTCTGATATCCAGATAGCTAGAGAAGCTGAGTTGGTGAGAAAAGGACATGATCATTTGCAGTCAAGGCAACAAGTTTCCAGTTAA	3912	0.4172	MSSDQPLLSEPDLPRVIHHRHRKSGSRGCICGNASFSSSVFDDALSQISDFDVKDRDRNVVLARDCSFHSAFGNSSSSFSADRDFHSSESGQFPLECPTRLVSSRGAMEQLRDANSRSVPFEISATGTGTGTGTSSRVHDRLNKSQRIRHKSVHFDDVALHEDSARLIYINDPKKTNDKYEFTGNEIRTSKYTIVTFLPKNLFIQFHRVAYLYFLAIAFLNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEIVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYAKQETASAVSSETCAVFGVIRCEQPNRNIYEFTANMEFNGVKCSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSAASPSKRSRLESYMNRETLWLSVFLFIMCLVVALGMGLWLVRHKNQLDTLPYYRKSYFNNGPDNGNKYKYYGIPMEVFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDLDMYDARSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKNYGTSLLMANNNTAAATVIPKRRWKLKSEIAVDSELMTVLQKDSNRDERIAVHEFFLTLAACNTVIPIPSDGRFSSCGTSESIEDIKHIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADSSMFSILANGSESNDSILHATQSHLSEYSSEGLRTLVVASRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIECNLKLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQRIIINGTSETECRNLLGDAKAKYCVTSSSRGHQNLKHKSNAAHCNLDIPNGSKSLSLPKWNPGKEEEINAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVLYTSVPTIIVGILDKDLSHRTLLQYPKLYGTGHRQEAYNMQLFWITMIDTVWQSIVLFYTPLFTYKDSSIDIWSMGSLWTIAVVILVNIHLAMDINRWVLITHVAVWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVCQIFWPSDIQIAREAELVRKGHDHLQSRQQVSS	1303

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi655g00002	1303	Gene3D	-	668	803	IPR023299	GO:0000166
	Gabi655g00002	1303	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	157	1287	-	-
	Gabi655g00002	1303	SUPERFAMILY	Calcium ATPase, transduction domain A	265	408	IPR008250	-
	Gabi655g00002	1303	CDD	P-type_ATPase_APLT_Dnf-like	184	1169	-	-
	Gabi655g00002	1303	NCBIfam	phospholipid-translocating P-type ATPase	182	1284	IPR006539	GO:0000287\|GO:0005524\|GO:0015914\|GO:0016020\|GO:0140326
	Gabi655g00002	1303	Pfam	Phospholipid-translocating P-type ATPase C-terminal	1037	1277	IPR032630	-
	Gabi655g00002	1303	SFLD	p-type atpase	539	1060	IPR044492	-
	Gabi655g00002	1303	Gene3D	-	821	1049	IPR023214	-
	Gabi655g00002	1303	SUPERFAMILY	HAD-like	542	1053	IPR036412	-
	Gabi655g00002	1303	Pfam	haloacid dehalogenase-like hydrolase	551	867	-	-

Showing 1 to 10 of 21 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi655g00002	Gabi-Chr655	21602	29775	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi655g00002	145	1286	Primary Pumps ATPases	AT5G04930	56.658	0.0	1330

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi655g00002	K14802		-	gmx:100812459	2179.83

Showing 1 to 1 of 1 entries