Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi653g00016 ATGGAAACAATGGAGAACAATTCAAGAGATGAATACCAGGAATTTGAATTGCCACCAGGATTCAGGTTTCATCCAACAGATGAAGAACTCATAACTCACTACCTCTCCCAAAAGGTTCTTGATAATTGCTTCTGTGCTAGAGCCATTGGGGAGGTTGATTTGAACAAGTGTGAACCATGGGACTTGCCTTGGAGGGCCAAAATGGGTGAAAAGGAGTGGTACTTTTTCTGTGTTAGGGACAGAAAATACCCAACTGGTTTAAGGACAAATAGGGCCACTGGTGCTGGCTATTGGAAGGCCACAGGCAAAGACAAAGAGATATACAGGGCAAAAGTACTTATTGGAATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCTCCAAGAGGTGAAAAAACAAACTGGATCATGCATGAATACAGATTAGAGGAGAAACATTCCATGCATAATGAATGGGCTATCTGCAGAGTTTTTCAGAAGAGTTCTTGTGGAAAGGAAATGCATATTCCTGAGTTGGTGAGGCTCAGCTCCTTTGAAAAAGAACTTCCTCCATTGATGGATTCTTCTCCATTCTATAGTGAAGCAAAAACTGCTGCTGGGGAATCATCACACATGACCTGCTTCTCAGATCCAAATCAAACTGAGGATCCAATGACACAAGATGACATAGTTGATAGCTTTGAAACTTCTATGTTGGCATCTTCATATTCTTCAAACCCCTCTGATATTTCCCCTGCCTCATGGACTTTTACCCAAGCTGCCCCTACTTTGTCCCACCAATCCACACAAATTGCACACCAAGTTGGGAATTCACTGTGCCAAGATTATTTTATGAATCAAGAACAGTCCATGTTGAGGATGTTGATTGAAAACCATGAACCAAGTTCAAAGCAGAAAGCTCAGGAAAGAGACTTTGATGCTGACACCTCCTCTTTGATGTACATCGATCAAATGTTTCAGTGA 963 0.4143 METMENNSRDEYQEFELPPGFRFHPTDEELITHYLSQKVLDNCFCARAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATGAGYWKATGKDKEIYRAKVLIGMKKTLVFYKGRAPRGEKTNWIMHEYRLEEKHSMHNEWAICRVFQKSSCGKEMHIPELVRLSSFEKELPPLMDSSPFYSEAKTAAGESSHMTCFSDPNQTEDPMTQDDIVDSFETSMLASSYSSNPSDISPASWTFTQAAPTLSHQSTQIAHQVGNSLCQDYFMNQEQSMLRMLIENHEPSSKQKAQERDFDADTSSLMYIDQMFQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi653g00016 320 FunFam NAC domain-containing protein 100-like 26 164 - -
Gabi653g00016 320 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
Gabi653g00016 320 Gene3D NAC domain 26 164 IPR036093 GO:0003677|GO:0006355
Gabi653g00016 320 ProSiteProfiles NAC domain profile. 17 160 IPR003441 GO:0003677|GO:0006355
Gabi653g00016 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 275 - -
Gabi653g00016 320 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi653g00016 Gabi-Chr653 119677 120875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi653g00016 16 292 NAC Transcription Factor Family AT5G07680 56.643 3.51e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi653g00016 NAM 4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi653g00016 - - gmx:100785620 463.381