Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi652g00018 ATGGCTTGGGACGAGAACTCTTTTTGGCTTGGGCTGGATGCAATATTCAATGTTGGCAATATCATCAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGCATGTTAATCGCAGTCCTGTTTATTCAAGAGGCTATCAAGGGAATGGTGAGTGAGTTTAAAGTTCCTAAAGAGGCAGACCCAACAATGGACAAGTATCAATTTCATTGGCTATATGCAAATGGATTGTTGGGCATTATATTCACCTTTGGCCTTCTCTATACCTCTTTAAAAAGCAGAAGAGCCAGGTCCTGGTTATATGGGACAGGGTGGTTCAGAAGTTTCATTGCAGACTACGGTGTGCCTTTCATGGTGGTGGTGTGGACAGCTCTGTCATTCATAGTACCAAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCAATGCTCCTCTGGCTTGGGAATCTACATCTTTACATCATTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCGGCATATATTTTTGCTGCTTTTGTTCCTGCCTTAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAGTTGGCACAACAGAAGGAATTCAATCTCAGGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCACGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTTTGCCTCAATCCCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGTTAATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAAGCAGAAAGCTAGCTACTCTGAAATGTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTCAGTGATCAAAGAACTAGAGGATTTGAAAGAGGTTGTCCTAAATGGAGAAGATAAAGGAGACAACAATAAGAGTACATTTGATCCTGAGAAACACATTGATGAATATTTGCCTGTCAGAGTAAACGAGCAGAGAGTGAGCAATCTTTTACAATCACTCCTTGTAGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATGCCAACTTCAGTTCTGTGGGGATACTTTGCTTACATGGCTATTGATAGTCTCCCAGGGAATCAATTCTGGGAAAGGATACTACTTCTTTTTGTAACTCCTAGTAGGTGGTACAAGTTGTTGGAAGGGGATCATGCTTCCTTTGTTGAGTCAGTACCATTCAGATACATAGTTTTCTTCACACTCTTCCAATGTGTATATTTCTTGGTTTGTTTCGGAGTGACATGGATTCCCATTGCTGGAATATTGTTCCCCTTGCCTTTCTTTTTCCTGATCACATTGAGGCAGCATATACTCCCCAAGCTATTCAATCCTCACCATCTTAGGGAACTAGATGCTGCTGAATATGAAGAAATAGCTGGTACTCCAAGACCAAGTTTCAATGTATCTTTAAGGGAGGTGGAATCACCTAGAGTAGAATCAAGGGAAATAGGCGATGCTGAAATATTAGACGAGTTAACTACTAACAGAGGAGAGTTGAAGGTCAGAACGGTTAGCTTTAGTGAGGAAAGACATAGCCAGGTTCATCCTGGTGCGTGA 1608 0.416 MAWDENSFWLGLDAIFNVGNIINRFTRIAGELFGMLIAVLFIQEAIKGMVSEFKVPKEADPTMDKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPFMVVVWTALSFIVPSKVPSGVPRRLNAPLAWESTSLHHWTVIKDMGKVSPAYIFAAFVPALMIAGLYFFDHSVASQLAQQKEFNLRKPSAYHYDILLLGFTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIKQKASYSEMYGKMQAVFIEMDNCPDNHSVIKELEDLKEVVLNGEDKGDNNKSTFDPEKHIDEYLPVRVNEQRVSNLLQSLLVGASVFAMPAIKKMPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLLEGDHASFVESVPFRYIVFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFFLITLRQHILPKLFNPHHLRELDAAEYEEIAGTPRPSFNVSLREVESPRVESREIGDAEILDELTTNRGELKVRTVSFSEERHSQVHPGA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi652g00018 535 Pfam HCO3- transporter family 71 248 IPR011531 GO:0006820|GO:0016020
Gabi652g00018 535 Pfam HCO3- transporter family 328 418 IPR011531 GO:0006820|GO:0016020
Gabi652g00018 535 PANTHER ANION EXCHANGE PROTEIN 10 476 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi652g00018 Gabi-Chr652 161497 164479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi652g00018 14 533 Antiporters AT1G15460 72.952 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi652g00018 K24194 - gmx:100811184 932.554