Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi652g00003 ATGGAGAGAGATTTCATGGGTCTTAGCTCAAAAGAATCATTATCTGGGGTGAAGGAGGAGATGAACAATGATATTGATGGGTGCAAAGACACAGGTTTCACAAAAGGTTCAGTGGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATCCGCATTTGATGTCTTTCAATGTTTCTCAAGATGATAAGACTAAAATGATGGGGTCTGATTCCATCACATCTGCTGGTTTGTTTGCCATCCCAAGTCTAGACAAGTTTGACTCTATTCATAAACGTGCTGCGGGTGAACTACAGAATATGAACGGTGCTAATGTGAAGCAACCATTGCTTGGGGGAATACCTGTTACAGCGCCTCATTCAGTTCTTCCCATCGTCGGTGCTGTTGCTGGAACAACTGAATCATGTAACAGTGTGAAACCATCTGCACCTGCTCCTCAACTTACCATCTTCTATGCGGGAACTGTAAATGTCTTCCATGATATAACTCCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGGGAATGGCTTATCTGCAGGTTCTAACATGGCACAGTCCAAAGTTCAGGCACTCGGCACGAAGTTGGCAGCAGGTGATAGTATGCCTGTGAGTCAACCCATAAATGTTCCACCCTGCTCTGGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTGCCCAATCAGGGAGTGGCTCAAGTTGCAATGAAGAATTTCTTGCAGCTAAAACATCTGGAGGTCCCATCAACTCTGTTAGCAAAGTGGAGACTCCAAAAGTAGTTAATGCAACCACCATGTTAACATCAGCTGTGCCGCAGGCTCGAAAAGCATCCTTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATTCAGCACCATATAACCTCAACAAGAAGTCTGAGGATGTTGCAATGCAGAATACAATGATTTCTAACATCTATGCAAGTACTGGTACTAATACGCTTTCAGCCAAGCAAGGATAG 990 0.4414 MERDFMGLSSKESLSGVKEEMNNDIDGCKDTGFTKGSVVKWPFLNKVSAHPHLMSFNVSQDDKTKMMGSDSITSAGLFAIPSLDKFDSIHKRAAGELQNMNGANVKQPLLGGIPVTAPHSVLPIVGAVAGTTESCNSVKPSAPAPQLTIFYAGTVNVFHDITPEKAQAIMLLAGNGLSAGSNMAQSKVQALGTKLAAGDSMPVSQPINVPPCSGLSSPLSVSSHTGAQSGSGSSCNEEFLAAKTSGGPINSVSKVETPKVVNATTMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEDVAMQNTMISNIYASTGTNTLSAKQG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi652g00003 329 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 95 302 IPR040390 -
Gabi652g00003 329 Pfam Jas motif 272 296 IPR018467 -
Gabi652g00003 329 Pfam tify domain 143 174 IPR010399 -
Gabi652g00003 329 ProSiteProfiles Tify domain profile. 140 175 IPR010399 -
Gabi652g00003 329 SMART tify_2 140 175 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi652g00003 Gabi-Chr652 35756 39300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi652g00003 39 302 Tify Gene Family AT3G17860 36.601 9.45e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi652g00003 tify 9.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi652g00003 K13464 - gmx:100799314 395.971