Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi652g00002 ATGGAGAGAGATTTCATGGGTCTTAGCTCAAAAGAATCATTATCTGGGGTGAAGGAGGAGATGAACAATGATATTGATGGGTGCAAAGACACAGGTTTCACAAAAGGTTCAGTGGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATCCGCATTTGATGTCTTTCAATGTTTCTCAAGATGATAAGACTAAAATGATGGGGTCTGATTCCATCACATCTGCTGGTTTGTTTGCCATCCCAAGTCTAGACAAGTTTGACTCTATTCATAAACGTGCTGCGGGTGAACTACAGAATATGAACGGTGCTAATGTGAAGCAACCATTGCTTGGGGGAATACCTGTTACAGCGCCTCATTCAGTTCTTCCCATCGTCGGTGCTGTTGCTGGAACAACTGAATCATGTGTGAAACCATCTGCACCTGCTCCTCAACTTACCATCTTCTATGCGGGAACTGTAAATGTCTTCCATGATATAACTCCTGAGAAGGCACAAGCTATCATGTTGTTGGCTGGGAATGGCTTATCTGCAGGTTCTAACATGGCACAGTCCAAAGTTCAGGCACTCGGCACGAAGTTGGCAGCAGGTGATAGTATGCCTGTGAGTCAACCCATAAATGTTCCACCCTGCTCTGGTCTTTCAAGTCCTTTATCTGTTTCTTCACATACTGGTGCCCAATCAGGGAGTGGCTCAAGTTGCAATGAAGAATTTCTTGCAGCTAAAACATCTGGAGGTCCCATCAACTCTGTTAGCAAAGTGGAGACTCCAAAAGTAGTTAATGCAACCACCATGTTAACATCAGCTGTGCCGCAGGCTCGAAAAGCATCCTTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATTCAGCACCATATAACCTCAACAAGAAGTCTGAGGATGTTGCAATGCAGAATACAATGATTTCTAACATCTATGCAAGTACTGGTACTAATACGCTTTCAGCCAAGCAAGGATAG 984 0.4421 MERDFMGLSSKESLSGVKEEMNNDIDGCKDTGFTKGSVVKWPFLNKVSAHPHLMSFNVSQDDKTKMMGSDSITSAGLFAIPSLDKFDSIHKRAAGELQNMNGANVKQPLLGGIPVTAPHSVLPIVGAVAGTTESCVKPSAPAPQLTIFYAGTVNVFHDITPEKAQAIMLLAGNGLSAGSNMAQSKVQALGTKLAAGDSMPVSQPINVPPCSGLSSPLSVSSHTGAQSGSGSSCNEEFLAAKTSGGPINSVSKVETPKVVNATTMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEDVAMQNTMISNIYASTGTNTLSAKQG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi652g00002 327 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Gabi652g00002 327 SMART tify_2 138 173 IPR010399 -
Gabi652g00002 327 Pfam Jas motif 270 294 IPR018467 -
Gabi652g00002 327 Pfam tify domain 141 172 IPR010399 -
Gabi652g00002 327 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 95 300 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi652g00002 Gabi-Chr652 35756 39300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi652g00002 39 300 Tify Gene Family AT3G17860 36.601 1.25e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi652g00002 tify 9.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi652g00002 K13464 - gmx:100799314 400.208