Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi645g00002 ATGATTTTGTTAGATGAAAAGGGTGGAAGGGTCCACGCTGCTGTCAAGGGTTCTTTGCATATCCGTAAAAAATTTTACAAAGGAGAAGTTTATTTCATAAAAAAATTTGGAGTTGGTTTGAATAGTGGTAGTTTCAGGCCAACTAAGCATGATTATCGTTTGTCTTTCAACTTGAGGACTGATGTAAAATCCACTATTGATTCTGCTATTCCCACCAATGGATTTGATTTTGTAGATTTTGATGTTATAGAGAAAGAGTCTTCTGATTCCCCTTATTTAGTAGATGTCATTGGTTTAGTCTCTGGAATAGGGGAAGTTCGTGAGCATATTATCTCCGGTAGGAAGACAAAAATGGTTGTCGTGGAGCTTGATAACCTCAGGGGTCACAAGCTCGAGTGCACTCTCTGGGAGGACTACGTGGACCAGGTGCAACAAATTTTGGGGAGTAATCAGTCTCCTCAAAACGTGATGATAGTTCAGCTTGCTAGAATAAAGGGTTTCAGGGGTGAGTTCACATAA 519 0.3988 MILLDEKGGRVHAAVKGSLHIRKKFYKGEVYFIKKFGVGLNSGSFRPTKHDYRLSFNLRTDVKSTIDSAIPTNGFDFVDFDVIEKESSDSPYLVDVIGLVSGIGEVREHIISGRKTKMVVVELDNLRGHKLECTLWEDYVDQVQQILGSNQSPQNVMIVQLARIKGFRGEFT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi645g00002 172 Gene3D - 1 67 IPR012340 -
Gabi645g00002 172 CDD RPA1_DBD_A_like 1 62 - -
Gabi645g00002 172 CDD RPA1_DBD_B_like 95 170 - -
Gabi645g00002 172 Gene3D - 69 172 IPR012340 -
Gabi645g00002 172 Pfam Domain of unknown function DUF223 1 90 IPR003871 -
Gabi645g00002 172 SUPERFAMILY Nucleic acid-binding proteins 1 67 IPR012340 -
Gabi645g00002 172 SUPERFAMILY Nucleic acid-binding proteins 75 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi645g00002 Gabi-Chr645 134515 135293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi645g00002 3 170 Core DNA Replication Machinery Family AT4G19130 29.032 4.09e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi645g00002 - - tpra:123908197 135.961