Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi642g00008 ATGTCTCACCAAAAGTTTTCCAGAAGATATGGTTTTCTTCTGCTTGATAATGTTGCTTCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCATCAGTTTAAAATTTTGCCTGAGATGTATCAAGTTGGATACACAAAGTTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGTGTCCAAAGTTGCTTGAGGGGTCACCAAGCTCGTTGTTCTCTCAAGGAGTTTCGGGGAGGAATCACTACTCTGCAGTCATTTATTAGGGGAGACAAAACCAGAAAGGCATATGCAGCTTTACTTCGGAGACATAGAGCTGTTGTTATTATACAGAAGCGGATAAAAGCAGTACTTGCAAGAAATAGAATGAGGACTATTAGTGATGCTGCAATTGTCATTTATTCGTGGTTTGTTTGGTCAGAAGATGCTCAGGAGACATTGGATGTTTTGAAATCCAGAGACTTGAAGTGCCGGGTACTTAGGGCTGAAGCTGACCAGTATGAATTGTTCCCATCTTTCACCAACGTCTGCAACAATATGAGAGCAGATGGTCTGAGTATGAATTGA 600 0.41 MSHQKFSRRYGFLLLDNVASQDPLSVSVAILHQFKILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCLRGHQARCSLKEFRGGITTLQSFIRGDKTRKAYAALLRRHRAVVIIQKRIKAVLARNRMRTISDAAIVIYSWFVWSEDAQETLDVLKSRDLKCRVLRAEADQYELFPSFTNVCNNMRADGLSMN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi642g00008 199 Gene3D - 67 118 - -
Gabi642g00008 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 111 IPR027417 -
Gabi642g00008 199 Gene3D - 1 61 - -
Gabi642g00008 199 ProSiteProfiles Myosin motor domain profile. 1 63 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi642g00008 199 SMART iq_5 113 135 IPR000048 GO:0005515
Gabi642g00008 199 SMART iq_5 64 86 IPR000048 GO:0005515
Gabi642g00008 199 SMART iq_5 87 109 IPR000048 GO:0005515
Gabi642g00008 199 Pfam IQ calmodulin-binding motif 92 108 IPR000048 GO:0005515
Gabi642g00008 199 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Gabi642g00008 199 Pfam IQ calmodulin-binding motif 69 86 IPR000048 GO:0005515
Gabi642g00008 199 PANTHER MYOSIN 1 154 - -
Gabi642g00008 199 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Gabi642g00008 199 ProSiteProfiles IQ motif profile. 67 94 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi642g00008 Gabi-Chr642 166149 167962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi642g00008 1 146 Myosins gene family AT1G50360 70.548 4.62e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi642g00008 - - gmx:100796845 264.233