Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi636g00015 ATGCGGATGAGTTGCAATGGATGCAGGGTACTCAGAAAAGGTTGCAGTGAGAATTGCAGCATAAGACCTTGTTTGCAGTGGATCAAGAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTTGCTAAGTTCTATGGTCGTGCTGGCCTCATGAACCTCGTCAACGCTGGCCCAGAGCATCTTCGTCCAGCGATTTTTCGTTCGTTGCTATACGAAGCATGCGGTCGAATAGTGAACCCGATTTACGGTTCGGTGGGTCTGTTGTGGTCAGGGAGCTGGCAGCTCTGTCAAGCCGCCGTTGAAGCCGTCTTGAGAGGCGCGCCGATCACCCCGATTACATCTGAAGCCGCCGCAAGCGGCCGGGGCCCACCGCTGAAAGCCTACGACATACGCCACGTTTCGAAGGACGAGAACTCCGCCGCTGGATGGACCGGTTGTTGCGCTACGGAAGAGGTGTTGAACCGGTCGGCGAGTCACGAGTCGTCGCTCAGCCACCAGTCGGAGGCGGCGAATAGCGGTGAACGAACCGATGAGATTGGCGATCATGTTGGTTTAGAGCTGACGCTTGGGTTCGAACCGGCATCACGTGCGCATCACGTGGTTCCTGTTAAGAAGAGGAGGATAGGATTAAATCATTATGGTGGTTCGGCTGAGAATGAGTCATGCAAGATGGAGCTGAGGCTTGAATACCCGGCTTGA 699 0.5465 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLRGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAAGWTGCCATEEVLNRSASHESSLSHQSEAANSGERTDEIGDHVGLELTLGFEPASRAHHVVPVKKRRIGLNHYGGSAENESCKMELRLEYPA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi636g00015 232 PIRSF AS2 144 231 IPR017414 -
Gabi636g00015 232 PIRSF AS2 1 171 IPR017414 -
Gabi636g00015 232 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gabi636g00015 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 174 - -
Gabi636g00015 232 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi636g00015 Gabi-Chr636 52140 53562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi636g00015 1 228 AS2 family AT3G02550 61.132 4.20e-109 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi636g00015 LOB 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi636g00015 - - gmx:100807854 358.221