Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi636g00014 ATGCGGATGAGTTGCAATGGATGCAGGGTACTCAGAAAAGGTTGCAGTGAGAATTGCAGCATAAGACCTTGTTTGCAGTGGATCAAGAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTTGCTAAGTTCTATGGTCGTGCTGGCCTCATGAACCTCGTCAACGCTGGCCCAGAGCATCTTCGTCCAGCGATTTTTCGTTCGTTGCTATACGAAGCATGCGGTCGAATAGTGAACCCGATTTACGGTTCGGTGGGTCTGTTGTGGTCAGGGAGCTGGCAGCTCTGTCAAGCCGCCGTTGAAGCCGTCTTGAGAGGCGCGCCGATCACCCCGATTACATCTGAAGCCGCCGCAAGCGGCCGGGGCCCACCGCTGAAAGCCTACGACATACGCCACGTTTCGAAGGACGAGAACTCCGCCGCGTCAAATGAAACTCAGCAACGAGTCAAGACTCGGTCCCGCGTCAAGCGAACTCTCGGCGTCGCTAAGCCGAAATCCAGCGAACATGTGTTGAACCGGTCGGCGAGTCACGAGTCGTCGCTCAGCCACCAGTCGGAGGCGGCGAATGCGGTGGAGGGTGAGAGCAAAGAGAGTGAAAGCATGGTTTCGGTGGAGACAGCGGAGACTTCGATCCTCTTCCGAGATGAACCGGAGTCGAACCCAAAGAGCGGTGAACGAACCGATGAGATTGGCGATCATGTTGGTTTAGAGCTGACGCTTGGGTTCGAACCGGCATCACGTGCGCATCACGTGGTTCCTGTTAAGAAGAGGAGGATAGGATTAAATCATTATGGTGGTTCGGCTGAGAATGAGTCATGCAAGATGGAGCTGAGGCTTGAATACCCGGCTTGA 852 0.5458 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLRGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQRVKTRSRVKRTLGVAKPKSSEHVLNRSASHESSLSHQSEAANAVEGESKESESMVSVETAETSILFRDEPESNPKSGERTDEIGDHVGLELTLGFEPASRAHHVVPVKKRRIGLNHYGGSAENESCKMELRLEYPA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi636g00014 283 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 240 - -
Gabi636g00014 283 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gabi636g00014 283 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Gabi636g00014 283 MobiDBLite consensus disorder prediction 173 189 - -
Gabi636g00014 283 PIRSF AS2 142 282 IPR017414 -
Gabi636g00014 283 PIRSF AS2 1 162 IPR017414 -
Gabi636g00014 283 MobiDBLite consensus disorder prediction 133 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi636g00014 Gabi-Chr636 52140 53562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi636g00014 1 279 AS2 family AT3G02550 63.701 7.83e-119 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi636g00014 LOB 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi636g00014 - - lja:Lj1g3v3317390.1 448.743