Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi636g00013 ATGCGGATGAGTTGCAATGGATGCAGGGTACTCAGAAAAGGTTGCAGTGAGAATTGCAGCATAAGACCTTGTTTGCAGTGGATCAAGAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTTGCTAAGTTCTATGGTCGTGCTGGCCTCATGAACCTCGTCAACGCTGGCCCAGAGCATCTTCGTCCAGCGATTTTTCGTTCGTTGCTATACGAAGCATGCGGTCGAATAGTGAACCCGATTTACGGTTCGGTGGGTCTGTTGTGGTCAGGGAGCTGGCAGCTCTGTCAAGCCGCCGTTGAAGCCGTCTTGAGAGGCGCGCCGATCACCCCGATTACATCTGAAGCCGCCGCAAGCGGCCGGGGCCCACCGCTGAAAGCCTACGACATACGCCACGTTTCGAAGGACGAGAACTCCGCCGCGTCAAATGAAACTCAGCAACGAGTCAAGACTCGGTCCCGCGTCAAGCGAACTCTCGGCGTCGCTAAGCCGAAATCCAGCGAACATGTGGACAACAATATCGGAACCGGGTTGGGTTCGGGTGAACCGGATGGTGGTCGGATCACGAGTGGATGGACCGGTTGTTGCGCTACGGAAGAGGTGTTGAACCGGTCGGCGAGTCACGAGTCGTCGCTCAGCCACCAGTCGGAGGCGGCGAATGCGGTGGAGGGTGAGAGCAAAGAGAGTGAAAGCATGGTTTCGGTGGAGACAGCGGAGACTTCGATCCTCTTCCGAGATGAACCGGAGTCGAACCCAAAGAGCGGTGAACGAACCGATGAGATTGGCGATCATGTTGGTTTAGAGCTGACGCTTGGGTTCGAACCGGCATCACGTGCGCATCACGTGGTTCCTGTTAAGAAGAGGAGGATAGGATTAAATCATTATGGTGGTTCGGCTGAGAATGAGTCATGCAAGATGGAGCTGAGGCTTGAATACCCGGCTTGA 945 0.5492 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLRGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQRVKTRSRVKRTLGVAKPKSSEHVDNNIGTGLGSGEPDGGRITSGWTGCCATEEVLNRSASHESSLSHQSEAANAVEGESKESESMVSVETAETSILFRDEPESNPKSGERTDEIGDHVGLELTLGFEPASRAHHVVPVKKRRIGLNHYGGSAENESCKMELRLEYPA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi636g00013 314 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Gabi636g00013 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 271 - -
Gabi636g00013 314 MobiDBLite consensus disorder prediction 206 220 - -
Gabi636g00013 314 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gabi636g00013 314 MobiDBLite consensus disorder prediction 206 260 - -
Gabi636g00013 314 MobiDBLite consensus disorder prediction 133 186 - -
Gabi636g00013 314 PIRSF AS2 1 313 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi636g00013 Gabi-Chr636 52140 53562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi636g00013 1 310 AS2 family AT3G02550 58.013 3.25e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi636g00013 LOB 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi636g00013 - - lja:Lj1g3v3317390.1 463.381