Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi635g00001 ATGACTGGTCTCTCTGATTCTTTTGGTGGCCACGACAGTTCCTTCCTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTTATTAATGGAGATTTTGTTGATTCAGCATCAGGAATGACATTTGAGACAATAGATCCAAGAACCGGAGAGGCAGTTGCGAGAATTAGCGAGGGAGCTAAAGAAGACATTGATGTTGCCGTTAAAGCGGCGCGTGAGGCGTTTGACTCAGGTCCATGGCCCCGCTTGCCCGGCGCTGAAAGAGGAAAAATTATGATGAAATGGGCGGACCTAATTGATCAAAACAGAGAAGAAATAGCAGCGTTAGATACTATTGATGCTGGCAAGTTGTACCATTTTGCTAAGGATGTAGAAATTCCTGCAGCAACAAAGACCCTACGTTACTATGCAGGTTCTGCTGATAAAATTCATGGCAATGTATTAAAAATGTCTGGGGAGTTCCATGCCTATACACTATTGGAACCAATTGGTGTTGTGGGACACATAATTCCCTGGAATGCCCCCACCTCCATCTTCTTCACCAAGGTTAGCCCTTCCCTAGCTGCAGGGTGCACCATGGTCCTTAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAGCTGGCTGGAATCCCAAATGGAGTGCTCAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGATATTGATGCGGTCAGCTTTACTGGTTCAATTGAAGTAGGTCGTGAAGTAATGCAGGCTTCAGCTAAGAGTAATTTAAAACCAGTTTCACTTGAATTAGGAGGCAAATCACCTCTCATTATTTTCGACGATGCTGATATAGACAAAGCTGTTGAACTTGCTCTCATAGGCATCCTATTTAACAAGGGAGAAGCTTGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGATCTATAATGAATTTGAGAAGAAGTTGGTAAAGAAGGCAAAAGCTTGGGTCATTGGGGATCCTTTTGATCCTAAAGTTCAGCAAGGGCCTCAGGCTGACAGGAACCAATTCGAAAAAATTCTTTCCTATATTGAACATGGAAAGAGGGAAGGAGCCACCCTTTTGACTGGAGGTAAAACAGTGGGCAGCAAAGGCTACTACATTGAACCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATATCACAGGATGAAATATTTGGCCCTGTAATGGTACTGATGAAGTTCAAGACCATTGAGGAAGCAATTAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGCATTGTAACCAAGAACTTGGATACCTCAAACACCATGTCAAGGTCTATTCGTGCAGGCATTATTTGGATCAACTGCTATTTTGCCTTTGGGGATGACGTCCCTTTTGGAGGGTATAAAATGAGTGGATTTGGAAGAGATTTAGGATTGGAAGCACTGCACAAGTACTTACAAGTTAAATCTGTTGTAACACCCATTTACAACTCTCCTTGGCTTTGA 1515 0.433 MTGLSDSFGGHDSSFLKMPTIKFTKLFINGDFVDSASGMTFETIDPRTGEAVARISEGAKEDIDVAVKAAREAFDSGPWPRLPGAERGKIMMKWADLIDQNREEIAALDTIDAGKLYHFAKDVEIPAATKTLRYYAGSADKIHGNVLKMSGEFHAYTLLEPIGVVGHIIPWNAPTSIFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSIEVGREVMQASAKSNLKPVSLELGGKSPLIIFDDADIDKAVELALIGILFNKGEACVASSRVFVQEGIYNEFEKKLVKKAKAWVIGDPFDPKVQQGPQADRNQFEKILSYIEHGKREGATLLTGGKTVGSKGYYIEPTIFSNVKEDMLISQDEIFGPVMVLMKFKTIEEAIKSANNTKYGLAAGIVTKNLDTSNTMSRSIRAGIIWINCYFAFGDDVPFGGYKMSGFGRDLGLEALHKYLQVKSVVTPIYNSPWL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi635g00001 504 Pfam Aldehyde dehydrogenase family 32 494 IPR015590 GO:0016491
Gabi635g00001 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Gabi635g00001 504 SUPERFAMILY ALDH-like 16 500 IPR016161 GO:0016491
Gabi635g00001 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Gabi635g00001 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Gabi635g00001 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 494 - -
Gabi635g00001 504 FunFam Aldehyde dehydrogenase3 274 463 - -
Gabi635g00001 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Gabi635g00001 504 FunFam Aldehyde dehydrogenase, putative 466 492 - -
Gabi635g00001 504 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 28 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi635g00001 Gabi-Chr635 3676 7378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi635g00001 13 504 Aldehyde Dehydrogenase Gene Family AT3G24503 68.357 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi635g00001 K12355 - gmx:100527654 873.618