Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi62g00006 | ATGGCTGAATTTCAAGACTATGTCCAACTTTTCTTTGTTTGGCTAGTCTCAACCATTCTGGTTCGAGCCATATTCACAAGAAATCAGAACAAGGGTCATCGTCCACCAAGTCCACCGGCACTACCTATCATTGGACACCTTCACCTTATCTCAAAATTACCTTACAAAAGTTTTCACAATCTCTCAACTCGCTATGGACCCATAATGCAACTTTTCCTAGGCTCTGTCCCTTGCATTGTAGTTTCAAATCCAGAAATCGCCAAGGAGTTCCTCAAAACCCATGAAACATGCTTCTCAAACCGCTTTAGAAGTGCTGCAGTTCATTACTTATCATATGGCTCCAAAGGCTTCGTTTTTGCACCTTATGGAAGTTATTGGAAATTCATGAAGAAAATTTGCATATCTGAGCTTCTTGGTGGCCGAACCCTTGATAAACTCCTCCCTTTGAGGCAACAAGAGACTCTCAGATTTTTGAGACTTTTGCAGAAGAAAGGGGAAGCTGGTGAGGCTGTTGATGTTGGTGGCGAACTCTTAATTCTCACAAATAGTATTATATCAAGAATGACTATGAACCAAACGTGTTCTGAAAATGATAATGATGTTGAAGACATTAGAAAGATGGTGATGGACGCTGCAGAGCTTGCAGGGAAGTTTAATGTTTCAGACTTTGTTTGGTTATGTAAGAATTTTGATTTGCAGGGAATGAAGAAAAGGCTTAAAGAGATTCATGACAGGTTTGATACCATGATGGAGAGGGTGATAGAGGAGCATGAAAGGGAAAGGAAGAAAAGGAAAGAAGAGGGTGAAGGTGCTGAATTTAAGGATCTACTTGAGATTTTGTTGGAAATAAAAGAAGACGAGAACACTGAGATAGTATTCACCGGAGAGAACATCAAGGCTTTCATCTTGGAGATGTTTATGGCAGGAACAGACACATCTTCAATAACAACAGAATGGGCTCTAGCTGAGTTAATCAACAACCCTCATGTGATGGAGAAAGCAAGACAAGAGATCGATTCAGTAACAGGAAAGAGTAGATTAATACAAGAGTCAGATCTTATCAACCTTCCTTACATGAGAGCAGTAGTTAAAGAAACATTAAGGATTCACCCCACATCCCCATTTATAGTAAGAGAATCATCTGAAAGCTGTAATGTTTGTGGTTATGAGATTCCTTCAAAGTGTTTGTTATTTGTTAATTTGTGGTCTATGGGGAGAGACCCCAACCTGTGGAAGGATCCACTTGAGTTCAGGCCACAGAGGTTTATCAATGAAGAGAACCAATTTGATGTGAGGGGACAGAATTTCCAACTAATGCCATTTGGGACAGGAAGAAGGGTGTGTCCTGGAGCCTCACTAGCACTTCAGGTTGTACCCACTACCCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTGATGGCACCGTTAACATGGAAGAAAAACCAGCCATGACCCTTCCAAGGGCTTATCCTTTGATTTGTGTCCCTGTGCCCCGCTTTAATTTTTTTTCTTCTGTATAA | 1524 | 0.4081 | MAEFQDYVQLFFVWLVSTILVRAIFTRNQNKGHRPPSPPALPIIGHLHLISKLPYKSFHNLSTRYGPIMQLFLGSVPCIVVSNPEIAKEFLKTHETCFSNRFRSAAVHYLSYGSKGFVFAPYGSYWKFMKKICISELLGGRTLDKLLPLRQQETLRFLRLLQKKGEAGEAVDVGGELLILTNSIISRMTMNQTCSENDNDVEDIRKMVMDAAELAGKFNVSDFVWLCKNFDLQGMKKRLKEIHDRFDTMMERVIEEHERERKKRKEEGEGAEFKDLLEILLEIKEDENTEIVFTGENIKAFILEMFMAGTDTSSITTEWALAELINNPHVMEKARQEIDSVTGKSRLIQESDLINLPYMRAVVKETLRIHPTSPFIVRESSESCNVCGYEIPSKCLLFVNLWSMGRDPNLWKDPLEFRPQRFINEENQFDVRGQNFQLMPFGTGRRVCPGASLALQVVPTTLAAMIQCFEWKVDGTVNMEEKPAMTLPRAYPLICVPVPRFNFFSSV | 507 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi62g00006 | 507 | SUPERFAMILY | Cytochrome P450 | 35 | 500 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 360 | 378 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | CDD | CYP93 | 66 | 497 | - | - | |
| Gabi62g00006 | 507 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | P450 superfamily signature | 448 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | FunFam | Cytochrome P450 family protein | 26 | 495 | - | - | |
| Gabi62g00006 | 507 | Pfam | Cytochrome P450 | 35 | 482 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gabi62g00006 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506|GO:0016705 | |
| Gabi62g00006 | 507 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 11 | 493 | - | - | |
| Gabi62g00006 | 507 | Gene3D | Cytochrome P450 | 19 | 492 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi62g00006 | Gabi-Chr62 | 116314 | 122974 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi62g00006 | 1 | 500 | Cytochrome P450 | AT5G06900 | 48.805 | 5.84e-177 | 505 |