Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi62g00004 ATGGCTGAATTTCAAGACTATGTCATACTTTTCTTGGTTTGTCTAGTCTCCACTATTCTGGTTCGAGCCATATTCACAAAAAAGAAGAACAAGGGTCATCGTCCACCAAGTCCACCAGCACTACCTATCATCGGAAACCTTCACCTTATTTCTCAATTACCTCACCAAAGTTTTCACAAGCTCTCAACTCGCTATGGACCCATAATGCAAATTTTCCTTGGCTCTGTACCTTGTGTAGTAGTTTCAAATCCAGAAATCGCCAAAGAGTTTCTTAAAACACATGAAACTTGCTTCTCTAACCGTTTTACAAATTATGCAGTTCACTATTTATCATATGGCTGTAAAGGTTTCTTATTTGCCCCTTATGGAAACTATTGGAAGTTCATGAAGAAAATTTGCATGTCTGAGCTTCTTGGTGGCCGAAACCTTGATAAACTTCTTCCTCTGAGACAACAAGAGACTCTGAGATTTTTGAGACTTTTGCAGAAGAAAGGGGAAGCTGGTGAGGGTGTTGATGTTGGTGGAGAGCTCTTGACACTGGCGAACAGTATTATATCAAGAATGACTATGAGCCAAACGAGTTCTGAAAGTGATAATGACGTTGAAGAGATTAGAAAGATGGTGATAGACACTGCAGAGCTTGCAGGGAAGTTTAATGTTTCAGACTTTATTTGGTTCTGTAAGAATTTTGATTTGCATGGAATGAAGAAGAGGCTTAAAGAGATTCATGACAGGTTTGATACCATGATGGAGAAGGTGATAGAGGAGCATGAAAAGGAAAGGAAGAGAAGGAAAGAAGGTGGTGAATATGCTGAATTTAGGGATCTACTTGACATTTTGTTGGAAATACATGAAGATGAAAGCACTGAGATAAAGTTTACCAGAGAAAACATCAAGGCTTTCATCTTGGACATATTTATGGCAGGAACAGACACATCTGCTATAACAACTGAATGGGCTCTAGCTGAGTTAATCAACAACCCGCATGTGATGGAGAAAGCAAGACAAGAGATCGATTCAGTAACAGGAAAGATTAGATTAATAAAAGAATCAGATCTTGTCAACCTTCCTTACTTGCAAGCTATAGTAAAAGAAACATTAAGGATTCACCCAACAGCCCCATTTATAGGGAGAGAATCATCAGAAAGCTGTATCGTTTGTGGTTATGAGATTCCAGCAAAAACTTCGTTAATTGTTAATTTGTGGTCTATGGGGAGAGACCCCAACCTGTGGAAGGACCCACTAGAGTTCAGGCCAGAGAGGTTTATTAGTGAAGAGAATCAATTAGATGTGAGGGGACAAAATTTCCAACTAATGCCATTTGGGACAGGAAGAAGGATGTGTCCTGGTACCTCATTAGCACTTCAGGTTGTACCCACTACCCTTGCTGCAATGATTCAATGTTTTGAATGGAAGGTTGATGGCACCGTTAACATGGAAGAGAAACCTGCCATGACACTTCCAAGGTCTTATCCTTTGGTTTGTGTCCCTGTGCCTCGCTTTAATTGTGTTCCTTCTACTGTTTAG 1527 0.4001 MAEFQDYVILFLVCLVSTILVRAIFTKKKNKGHRPPSPPALPIIGNLHLISQLPHQSFHKLSTRYGPIMQIFLGSVPCVVVSNPEIAKEFLKTHETCFSNRFTNYAVHYLSYGCKGFLFAPYGNYWKFMKKICMSELLGGRNLDKLLPLRQQETLRFLRLLQKKGEAGEGVDVGGELLTLANSIISRMTMSQTSSESDNDVEEIRKMVIDTAELAGKFNVSDFIWFCKNFDLHGMKKRLKEIHDRFDTMMEKVIEEHEKERKRRKEGGEYAEFRDLLDILLEIHEDESTEIKFTRENIKAFILDIFMAGTDTSAITTEWALAELINNPHVMEKARQEIDSVTGKIRLIKESDLVNLPYLQAIVKETLRIHPTAPFIGRESSESCIVCGYEIPAKTSLIVNLWSMGRDPNLWKDPLEFRPERFISEENQLDVRGQNFQLMPFGTGRRMCPGTSLALQVVPTTLAAMIQCFEWKVDGTVNMEEKPAMTLPRSYPLVCVPVPRFNCVPSTV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi62g00004 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 493 - -
Gabi62g00004 508 CDD CYP93 66 497 - -
Gabi62g00004 508 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 FunFam Cytochrome P450 family protein 26 495 - -
Gabi62g00004 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Gabi62g00004 508 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 Coils Coil 331 351 - -
Gabi62g00004 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00004 508 Gene3D Cytochrome P450 19 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi62g00004 Gabi-Chr62 97055 101190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi62g00004 1 500 Cytochrome P450 AT5G06900 51.195 0.0 531