Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi62g00003 ATGGCTGAATTTCAAGATTATGTCACACTTTTCTTGGTTTGGCTAGTCTCCACAATTCTGGTTCGAGCCATATTCAAAAAAAATCAGAACAAGGGTAATCGTCCACCAAGTCCACCAGCACTACCTATCATTGGACACCTTCACCTTATTTCTCAATTACCTCACCAAAGTTTTCACAAGCTCTCAACTCGCTATGGACCCATAATGCAAATTTTCCTTGGCTCTGTGCCTTGTGTAGTAGTTTCAAATCCAGAAATCGCCAAGGAGTTTCTTAAAACCCATGAAACATGCTTCTCAAACCGTTTTACAAGTTATGCAGTTCACTATTTATCATATGGCTCTAAAGATTTCTTATTTGCCCCGTATGGAAACTATTGGAAGTTCATGAAGAAAATTTGCATGTCCGAGCTACTTGGTGGCCGAAACCTTGATAAACTTCTTCCATTGAGGCAACAAGAGACTCTGAGATTTTTGAGACTTTTGCAGAAGAAAGGGGAAGCTTGTGAGGGTGTTGATGTTGGTGGCGAACTCTTGACTCTGGCGAATAGAGTTATATCAAGAATGAGCATGAGCCAAACGAGTTCTGAAAATGATAATGACGTTGAAGAGATTAGAAAGATGGTGATAGACACTGCAGAGCTTGTAGGGAAGTTTAATGTGTCAGACTTTATCTGGTTCTGTAAGAATTTTGATTTGCAGGGAATGAAGAAAAGGCTTAAAGAGATTCATGACAGGTTTGATACCATGATGGAGGGGGTGATAGAGGAGCATGAAAGGGAAAGGAAGAAAAGGAAAGAAGAGGGTGAAGGTGCTGCTGAATTTAGGGATCTACTTGACATTTTGTTGGGAATACATGAAGATGAGAGCAGTGAGATAAAATTGACAAGAGAGAACATCAAGGCTTTCATCCTGGACATATTTATGGCAGGAACAGACACATCTGCTATAACCATAGAATGGGCACTAGCTGAGTTAATCAACCACCCTCATGTAATGGAGAAAGCAAGACAAGAAATCGATTCGGTAACAGGAAAGACTAGATTAATACAAGAGTCAGATCTTATCAACCTTCCTTACTTGCAAGCTATAGTTAAAGAAACATTAAGGATTCACCCTACATCCCCTTTTATAGATAGAGAATCATCAGAAAGTTGTAACGTTTGTGGTTATGAGATTCCAGCAAAGACCTGGTTATTTGTTAATTTGTGGTCTATGGGGAGAGACCCCAACCTGTGGAAGGACCCACTAGAGTTCAGGCCAGAGAGGTTTATTAGTGAAGAGAACCAAGTAGACGTGAGGGGACAACATTTCCAACTAATGCCATTTGGGACAGGAAGAAGGATGTGTCCTGGTACCTCATTAGCACTTCAGGTTGTACCCACTACCCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTGATGGCACCGTTAACATGGAAGAGAAACCAGCCATGACTCTTCCAAGGGCTTATCCTTTGGTTTGTGTCCCTGTACCTCGTTTTGATTGTGTTCCTTCTATTGTATAG 1530 0.4098 MAEFQDYVTLFLVWLVSTILVRAIFKKNQNKGNRPPSPPALPIIGHLHLISQLPHQSFHKLSTRYGPIMQIFLGSVPCVVVSNPEIAKEFLKTHETCFSNRFTSYAVHYLSYGSKDFLFAPYGNYWKFMKKICMSELLGGRNLDKLLPLRQQETLRFLRLLQKKGEACEGVDVGGELLTLANRVISRMSMSQTSSENDNDVEEIRKMVIDTAELVGKFNVSDFIWFCKNFDLQGMKKRLKEIHDRFDTMMEGVIEEHERERKKRKEEGEGAAEFRDLLDILLGIHEDESSEIKLTRENIKAFILDIFMAGTDTSAITIEWALAELINHPHVMEKARQEIDSVTGKTRLIQESDLINLPYLQAIVKETLRIHPTSPFIDRESSESCNVCGYEIPAKTWLFVNLWSMGRDPNLWKDPLEFRPERFISEENQVDVRGQHFQLMPFGTGRRMCPGTSLALQVVPTTLAAMIQCFEWKVDGTVNMEEKPAMTLPRAYPLVCVPVPRFDCVPSIV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi62g00003 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 FunFam Cytochrome P450 family protein 26 496 - -
Gabi62g00003 509 CDD CYP93 66 498 - -
Gabi62g00003 509 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 494 - -
Gabi62g00003 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi62g00003 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi62g00003 Gabi-Chr62 72012 80781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi62g00003 1 501 Cytochrome P450 AT5G06900 51.292 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi62g00003 K24188 - gmx:100805931 750.74