Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00162 ATGGTGGAAGAAGGTGGGGATGCGGTTGCAGTTGATGCACGTTCAACAGAAGATTGGTTGTTGCAAGCACAGGAACTTGTTCCTGTTGCTCTTGCTAAAGCAAAAGAGGTTAAAGGTTTCCCTGGTAGGTGGAAGATGATCATATCGAAATTGGAACAAATCCCATCACGTTTATCAGACTTGTCTAGCCACCCTTGTTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACAATCAGAGAAGCCATTGAATTGGCTGAGTTCTGTGTGAAGGAGAAGTATGGGGGTAAGCTTCGGATGCAGAGTGATCTTGATGCATTAACTGGGAAACTGGATTTGAACTTAAGGGATTGTGGCCTTTTGACCAAGACAGGTGTGCTTGGTGAGGCTACTTTGCCATTAACTGCTTCTGGTCCTATGGCAGAATCAGATATTGCAACACACAGCAATATAAGGGAACTTCTTGCTCGCCTTCAGATTGGTCACTTGGAAGCAAAGCACAAAGCTTTAGACAAACTCTATGATGTTATGAAAGAAGATGAGAAGAATGTTTTGGCTGTTCTGGGTAGGAGCAATGTTGCTGCTTTAGTTCAATTGCTTACAGCAACATCTCCTAGGATAAGGGAGAAAACGGTTACTGTTATATGCTCTCTTGTGGAATCAGGTAACTGTGAAAACTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATAAGACTTGTTGAATCTGGTAGCACTTTGAGTAAAGAGAAGGCTACAGTGTCACTTCAAAGGTTGTCAATGTCAGCTGAAACAACCCGTTCAATTGTTGGACATGGTGGGGTTCGTCCATTGATTGAGCTTTGTGAAAATGGTGATTCTGTGTCACAAGCTGCTGCTGCTTGTACTTTGAAGAATGTATCAGCTGTACCTGAGGTGAGACAGACTCTTGCTGAAGAAGGTATTGTGAAGGTTATGATCAACCTCCTGAACTGTGGGATTTTGTTGGGTTCCAAAGAGTATGCTGCTGAGTGCTTGCAGAATCTCACTGCAAGCAATGAGAATTTGAGAAGGTCTGTTATATCAGAAGGTGGTGTTAAGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCAGTTGGAGCATTGAGAAATTTGGTTGGATCAGTTTCTGAGGAAAATTTGGTTTCTCTTGGTTTCATACCCCGTTTGGTTCATGTGCTGAAGTCTGGATCCTTGGGAGCTCAACAAGCGGCTGTGTCTGTTATATGCCGAGTTTGCAGCTCAATGGAGATGAAGAAAATGGTTGGTGAAGCTGGATGCATTCCTCTTCTTGTGAAGATGCTTGAGGCTAAAGCAAACAGTGCAAGAGAGATTGCTGCTCAAGCAATTGCGAGCTTAATGGTTCTGTCCCAAAATCGCAGAGATGTTAAGAAGGATGATAAAAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCGAGCCCACAGAACAATGCAAAAAAATATGCAGTTTCTTGCCTTGGATCACTTTCTGCAAGTAAGAAATGTAAGAAACTTATGATTTCATATGGAGCAATTGGGTATCTGAAGAAGCTTTCAGAGATGGACATTCCAGGAGCTAAAAAGCTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGAAAATAG 1683 0.4272 MVEEGGDAVAVDARSTEDWLLQAQELVPVALAKAKEVKGFPGRWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTIREAIELAEFCVKEKYGGKLRMQSDLDALTGKLDLNLRDCGLLTKTGVLGEATLPLTASGPMAESDIATHSNIRELLARLQIGHLEAKHKALDKLYDVMKEDEKNVLAVLGRSNVAALVQLLTATSPRIREKTVTVICSLVESGNCENWLVSEGVLPPLIRLVESGSTLSKEKATVSLQRLSMSAETTRSIVGHGGVRPLIELCENGDSVSQAAAACTLKNVSAVPEVRQTLAEEGIVKVMINLLNCGILLGSKEYAAECLQNLTASNENLRRSVISEGGVKSLLAYLDGPLPQESAVGALRNLVGSVSEENLVSLGFIPRLVHVLKSGSLGAQQAAVSVICRVCSSMEMKKMVGEAGCIPLLVKMLEAKANSAREIAAQAIASLMVLSQNRRDVKKDDKSVPNLVQLLDPSPQNNAKKYAVSCLGSLSASKKCKKLMISYGAIGYLKKLSEMDIPGAKKLLERLERGKLRSLFSRK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00162 560 Gene3D - 147 332 IPR011989 -
Gabi629g00162 560 Gene3D - 333 546 IPR011989 -
Gabi629g00162 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 279 IPR000225 GO:0005515
Gabi629g00162 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 558 - -
Gabi629g00162 560 SUPERFAMILY ARM repeat 156 535 IPR016024 -
Gabi629g00162 560 SMART arm_5 308 349 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 430 470 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 185 225 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 392 429 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 471 513 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 267 307 IPR000225 GO:0005515
Gabi629g00162 560 SMART arm_5 350 389 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00162 Gabi-Chr629 1708196 1710047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00162 379 543 U-box Gene Family AT3G54790 30.178 6.14e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00162 - - gmx:100809488 959.133