Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00150 ATGGAGGATGTTAATGTTGTTTCGGAACATAGTACTAAAGCAATTGAAGAGCTTCTGAGAGGGCGTGAGTTTGCTAACCAGCTTAAACAACTCATCAATATTGGTGATGATCATGATGATCAGTCAGCAACAACAACCCCGTTTGTCCAAAGCCTTGTGAAGAATGTTCTAACCTCCTTCACCAACGCCTTCTTGCTCTTGAACAAATACCCCACTAATTCCCAATCACATAATCAGGTTTCTCAGATTCAAAAAAGCGGCTACAGTACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGACTTCCACCATTAAGGACAGAAGAGGGTGTTACAAGAGAAGAAGAACTACACAAACATATGAGAAGTTGTCCAAAACTACAACAGGTGATGGCCATCAAGGGAGAAAGTATGGCCAAAAATTGATACTCAATTCCAAATACTCAAGGCACTACTACAGGTGCACTCACAAGTTTGATCAGGGTTGCCAAGCAACAAAACAGGTGCAGCAAGTTCAAGAGGAGCCTCCATTGCATAAGATCACCTATTATGGTCATCACACTTGCACAAACTTCTTACTAAACCCTGAGATCATACTTGATTCCAATTCTCCTCCTAATGACTCTTCCATATTGCTTAGCTTTAACAACACCTTCCCAATTCCAACAAAACAAGAGTGCCCCTTATTATCACCATCTTTTCCCACTCCACCACTTGAGAAGTGTATGGAGGAACTTCCTTCAATATCTTCCCCAGATGATTACCTGCTCTCCCCTCACCCCACCTTAGATAATGCTTTTAGGGATGACACTCTATCATCTGTCCTCCAATCTGATCACAGAGATGTCATGTCTGGTTTCTTGTATGATTCTTTTGACCTTGATGATGATGTCTTTCAGAGCATTTCGCTGGTTTTTGATGATTCAAGCGGAGGTATAGGGTGTGCTCCGTGGGCTTGGAGTGTTGGATATCGTCAAGTAGTTTTGGAAAGTGATTCATCATGTGTTATTACTATGCTCACTAGTATTGCTGCAACAGACTGTGAGGGTCATCTGATCTACAAGCATGGCTTCAAAAAGAATGGACTCTTAGGATACAGCACACCTATAGAGAAGACCACATATGTTATTCAGTAA 1134 0.4153 MEDVNVVSEHSTKAIEELLRGREFANQLKQLINIGDDHDDQSATTTPFVQSLVKNVLTSFTNAFLLLNKYPTNSQSHNQVSQIQKSGYSTKSEDSQESCKTSTIKDRRGCYKRRRTTQTYEKLSKTTTGDGHQGRKYGQKLILNSKYSRHYYRCTHKFDQGCQATKQVQQVQEEPPLHKITYYGHHTCTNFLLNPEIILDSNSPPNDSSILLSFNNTFPIPTKQECPLLSPSFPTPPLEKCMEELPSISSPDDYLLSPHPTLDNAFRDDTLSSVLQSDHRDVMSGFLYDSFDLDDDVFQSISLVFDDSSGGIGCAPWAWSVGYRQVVLESDSSCVITMLTSIAATDCEGHLIYKHGFKKNGLLGYSTPIEKTTYVIQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00150 377 Gene3D WRKY domain 110 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi629g00150 377 MobiDBLite consensus disorder prediction 75 100 - -
Gabi629g00150 377 Pfam WRKY DNA -binding domain 130 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00150 377 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 206 IPR044810 GO:0003700
Gabi629g00150 377 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00150 377 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00150 377 SUPERFAMILY WRKY DNA-binding domain 125 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi629g00150 377 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00150 Gabi-Chr629 1639190 1651549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00150 13 201 WRKY Transcription Factor Family AT3G56400 36.453 5.42e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi629g00150 WRKY 2.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00150 - - gmx:102670495 284.263