Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00149 ATGGAAAATCAATCTACAAACGGCAAAAAGGCAATAGAAGAAGAGTTAATAAGAGGGCGTGACATGGCAAACGAGTTAGTTGAAGTACTTGCAAACGAGGCCGAATGGTCGAAGTTAGTGTTACCAGTTGCTGAAGATCTTGTTCGCAATGTAATGAGATCATTCACAAATACCCTTTTGCTCTTGAACACCAACCATGGTGACTTCAATGAGGTGGCGGCGCCTATCACTATTGGTGATTTCTCTTTCTCCACTGCCAATTTCCAAAAGCTGAAGGATATGGATGAAACTTGCAACAGTATCAAAACTCCCAACACCAAAAGTCGAAGAGGGTGCTACAAGAGAAAATCAATTGCGCCAACTTGGGAGGAGGACACCTCAATTCTGATTGAAGATGGCCATGGGTGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACCTCAGGAGCTACTACAGGTGTACTCACAAGTACGATGAGGGTTGCGAAGCAATCAAACATGTTCAGAGAATTCAAGAAGACCCTCCGTTGTACCGGACAACGTATTATGGCTATCACACTTGCAAAAGCCCTTTGAATCCCGAGATAATTTTGGAACCTTTGTCTTCCTCTGTCTCTTCTACATTACTTAGCTTTAATAACAACCTTCCAAGCAAACAAGAACAACCTTTTTCATCGCCATTTTTTGCATCAAAGAAACAGAAGCCAACGGAAGTGGTTCACTATGACCATATTGCTCAAAACCAATTGTCCTCCTCAGAAGACCTCCTATTATGCGATTATGAAATTTATTTCGATTATTCGAGGCATGTCACTATGCTATCATCGACCGAATCTGTTGAATTTGACAATTTTTATGAGCAGTTTGGATTTTGA 882 0.4093 MENQSTNGKKAIEEELIRGRDMANELVEVLANEAEWSKLVLPVAEDLVRNVMRSFTNTLLLLNTNHGDFNEVAAPITIGDFSFSTANFQKLKDMDETCNSIKTPNTKSRRGCYKRKSIAPTWEEDTSILIEDGHGWRKYGQKMTMNAKYLRSYYRCTHKYDEGCEAIKHVQRIQEDPPLYRTTYYGYHTCKSPLNPEIILEPLSSSVSSTLLSFNNNLPSKQEQPFSSPFFASKKQKPTEVVHYDHIAQNQLSSSEDLLLCDYEIYFDYSRHVTMLSSTESVEFDNFYEQFGF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00149 293 Gene3D WRKY domain 107 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi629g00149 293 ProSiteProfiles WRKY domain profile. 125 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00149 293 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 216 IPR044810 GO:0003700
Gabi629g00149 293 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00149 293 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi629g00149 293 SUPERFAMILY WRKY DNA-binding domain 126 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00149 Gabi-Chr629 1613717 1617604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00149 9 190 WRKY Transcription Factor Family AT3G56400 35.484 1.10e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi629g00149 WRKY 8.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00149 - - gmx:100792193 372.474