Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00143 ATGGCTGCCGAAGCTTCTCAAGACGTTGATCTCAAGCTTGGAGAACCCAAGGGACCCAAAGAGGAGCCGGAGACGGAGAATGGGTCGCCGTCGACGGCGGCCATACGCGTGATGCCGGTGGCGGTACACGTACCGGCGGGGATGTCTATGTCCATGTCCATGCAAGTGAGCAAGGCTTTGGCCCAAGCCCAAGCCCAACAACCACCGCAGAAAAGGGCCTCCACCAAAGACCGCCACACCAAGGTGGAGGGTCGAGGCCGGAGGATCCGAATGCCCGCAACATGCGCGGCCCGGATCTTTCAGCTGACCCGAGAACTCGGGCACAAGTCCGACGGCGAGACAATCCGGTGGCTCCTCGAACACGCGGAGCCGGCCATCATCGCCGCCACCGGCACCGGAACCGTACCCGCCATCGCGATGTCCGTCAACGGAACCCTCAAGATCCCAACCACAACAACTTCAACAACAGCCTACAGCAAAAACTCCGACCCGGAATCCGGCGACCCGCCCGAGAAGAAAAAACGCAAACGACCCGCGAACAGTGCTTACGTGGACATAAACGACGGCGCCGTTTCAGTCTCCGCGGGACTAACAACCTCAACACCGAACCCATCGGCCACCGCGACAATTCCGCAACAAACCGCGATTCCGTTACCGCAAGGCGTGGTCCCCATGTGGGCCATACCCTCAAACGCCGTCGTTCCAACCGCAGGGGCGTTCTTCGTGGTTCCTCCCATGGCTGGACCTTCGAACCAGCCTCAGTTCTTCACCATAGCTCGTCCAATCTCCGCCTTCGTCTCCTCCATGGTCACCCCGCTTCAACTCCAAACAACCTCAACCTCCGTTCCGTCGTCGAAATCGCCGGCGAGAGCGACCTCCATGGCTCCGACCACCACCGCATCCTCCGCCGTATCCGGCGTCACGACGACGCAGATGCTGAGAGATTTCTCGCTTGAAATCTACGACAGGCAAGAGCTTCAATTCATGTCACGCTCTTCTTCGAAGCATTGA 1011 0.5974 MAAEASQDVDLKLGEPKGPKEEPETENGSPSTAAIRVMPVAVHVPAGMSMSMSMQVSKALAQAQAQQPPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTTSTTAYSKNSDPESGDPPEKKKRKRPANSAYVDINDGAVSVSAGLTTSTPNPSATATIPQQTAIPLPQGVVPMWAIPSNAVVPTAGAFFVVPPMAGPSNQPQFFTIARPISAFVSSMVTPLQLQTTSTSVPSSKSPARATSMAPTTTASSAVSGVTTTQMLRDFSLEIYDRQELQFMSRSSSKH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00143 336 MobiDBLite consensus disorder prediction 1 36 - -
Gabi629g00143 336 MobiDBLite consensus disorder prediction 278 303 - -
Gabi629g00143 336 MobiDBLite consensus disorder prediction 58 85 - -
Gabi629g00143 336 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Gabi629g00143 336 MobiDBLite consensus disorder prediction 149 163 - -
Gabi629g00143 336 MobiDBLite consensus disorder prediction 10 24 - -
Gabi629g00143 336 Pfam TCP family transcription factor 74 168 IPR017887 -
Gabi629g00143 336 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 283 IPR005333 GO:0003700
Gabi629g00143 336 MobiDBLite consensus disorder prediction 165 181 - -
Gabi629g00143 336 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00143 Gabi-Chr629 1568445 1570454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00143 57 335 TCP Transcription Factor Family AT2G45680 59.091 7.01e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi629g00143 TCP 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00143 - - gmx:100804760 437.958