Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00141 ATGGACAATTATGGGTCTTCATCACCATATGGGTATCCAAACCCATATTTATACCCTGGCAACACTCCTCCATATCCACCTCCAGCTTCAGGTGCTGATCCATATGCACCTACTCCTTATCCATATCCACCCAATCCTTCACATTCCTTCAACTATTCCAATCCACAACCTCCTCCACCACCCTCCTCCTCAGCCCCTTATCCTAGCCACATAGACTATTCCTACCCCCCACCTCCTCAACCATCTTATACTTATCCTTACCCTTACCAAGTTCCTCCAACTAGTGATAGTTCAAACCCTCCTCATAGTTCTGCTTACCCTCCTTTGGATGATCTTATGAGCAATGTTAGGTTGTCTGATAATCAGCAAACTGCAACTGCACCTCCTGTGCATCTATTCACACATTCTATTTCAGTTACAGATCATGAGAGGAGAGAGGAGTTTCATGGCTATTCTAGTAACTCCTTCTCTGGTTTGGGATCCTCCTACCCTGGTCAGGGGGATTCTTCTAAGCTTTCAGCTTATTCTGGCTCATTTGATGACTCAGTGCATAGTCAGAGTTTGCAGATTGTTCCAGCACAGGACAAAGGGTCTTTGAGGGTTTTGCTCCTGCATGGTAATTTAGATATATGTGTTCATGGAGCCAAAAATCTTCCCAATATGGACATGTTCCATAAAACTCTAGGGGATATGTTTGGTAAGTTACCTGGTAATATGGGAAGTAAGATTGAAGGGACAATGAGTAAGATTACCAGTGATCCTTATGTATCAATTTCTGTATCAAATGCTGTTATTGGGAGGACTTTTGTGATTAGCAACAGTGAGAACCCTGTGTGGGAGCAACATTTTTATGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTCTTGTTAAGGACAGTGATGTGGTGGGTTCACAGCTCATTGGGATTGTGGCAATTCCTGTGGAACAAATATACTCAGGGGGAAAAGTACAAGGGACCTACCCTATCCTGAATAACAATGGGAAGCCTTGTAAGCCAGGACCTGACTATATTGGGGTTCCTGGCACATATTTTCCATTGAGGAAAGGTGGAACTGTTAATCTCTATCAAGATGCACATGTTCCAGATGGTTGCCTCCCCAATGTGAGGCTTGACAATGGAATGTATTATGCTCATGGAAAGTGTTGGCTTGACATCTTTGATGCTATTCGTCAAGCTCAGCGTTTGATTTACATTACTGGGTGGTCAGTGTGGCACCAAGTTAAGTTGGTAAGGGATGCTGGTCATGCATCAAATTTCACACTGGGTGATCTTCTGAGGTCTAAGTCACAGGAAGGAGTACGAGTTCTTCTCCTTGTCTGGGATGACCCCACGTCAAGAAGCATTCTCGGTTATAACACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAGCACTCCTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGCCGGAAAACGACATAGCTGGGTCAAGCAAAGGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATCATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCAACCATCCTCTCTTTAGGACACTGCAGACATTTCATAAGGATGACTATCACAACCCAACTTTCACGGGTAATGTTGGTGGTTGTCCCCGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACCAACTTTGAGGAGCGCTGGTTAAGAGCTGCAAAGCCTCAAGGGATAAAAAAATTGAAGACTTCATACGATGATGCGTTGCTTAGGCTAGAAAGAATCCCGGATATTATCCACATGTCGGATGCTCCTAGTGGAGGTGGTGATAATCCTGAAGCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTTAAGGGGTTTCCAAAGGAGCCAAAAGATGCATCAAGCAAGAACCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTAAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAATCAAAATAAAGACATTGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTGAAGATTGCTGAAAAGATAAGGGCAAAGGAGAGATTTGCAGTGTACATCATTATTCCAATGTGGCCAGAGGGGGTTCCAACAGGGGCTGCGACCCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTATAAGGCTTTGGTTGAAGCTGGGCTTGAAGCAGCATATTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGCAATCGGGAGGCCATTGATATGCATGAGAATATCCCTGTGTCTGGAACTCCACCCCAAGCAAATAGCCCACAAGCAAATAGTCGAAATAGCCGGCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGATCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTCGTCATACCTGGGCAAGAAAACATTCTTATCCACATGGACAGATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGCACAATTGAAGACTGCTTCTTACAACCAGAGAGTCTGGAATGTGTGAGAAGGGTTAGAACAATGGGTGAACTGAACTGGAAACAATTTTCAGAAAATGAAGTAACAGAGATGAGAGGGCATCTACTCAAGTACCCAGTAGAAGTTGATAGAAAGGGTAAGGTTAGGTCACTTCCTGGCCAAGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTAGGATCATTTATTGCCATTCAGGAAAATCTAACCACTTGA 2985 0.4285 MDNYGSSSPYGYPNPYLYPGNTPPYPPPASGADPYAPTPYPYPPNPSHSFNYSNPQPPPPPSSSAPYPSHIDYSYPPPPQPSYTYPYPYQVPPTSDSSNPPHSSAYPPLDDLMSNVRLSDNQQTATAPPVHLFTHSISVTDHERREEFHGYSSNSFSGLGSSYPGQGDSSKLSAYSGSFDDSVHSQSLQIVPAQDKGSLRVLLLHGNLDICVHGAKNLPNMDMFHKTLGDMFGKLPGNMGSKIEGTMSKITSDPYVSISVSNAVIGRTFVISNSENPVWEQHFYVPVAHHAAEVHFLVKDSDVVGSQLIGIVAIPVEQIYSGGKVQGTYPILNNNGKPCKPGPDYIGVPGTYFPLRKGGTVNLYQDAHVPDGCLPNVRLDNGMYYAHGKCWLDIFDAIRQAQRLIYITGWSVWHQVKLVRDAGHASNFTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYNTDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPNHPLFRTLQTFHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPQGIKKLKTSYDDALLRLERIPDIIHMSDAPSGGGDNPEAWHVQIFRSIDSNSVKGFPKEPKDASSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWNQNKDIGANNLIPMEIALKIAEKIRAKERFAVYIIIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAYSPQDYLNFFCLGNREAIDMHENIPVSGTPPQANSPQANSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPRHTWARKHSYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRTMGELNWKQFSENEVTEMRGHLLKYPVEVDRKGKVRSLPGQEEFPDVGGKIVGSFIAIQENLTT 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00141 994 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 840 867 IPR001736 GO:0003824
Gabi629g00141 994 SUPERFAMILY Phospholipase D/nuclease 385 604 - -
Gabi629g00141 994 SUPERFAMILY Phospholipase D/nuclease 663 926 - -
Gabi629g00141 994 CDD C2_plant_PLD 201 343 - -
Gabi629g00141 994 PANTHER PHOSPHOLIPASE D 198 990 IPR015679 -
Gabi629g00141 994 MobiDBLite consensus disorder prediction 16 88 - -
Gabi629g00141 994 Pfam C2 domain 206 331 IPR000008 -
Gabi629g00141 994 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 204 336 IPR035892 -
Gabi629g00141 994 SMART C2_3c 207 328 IPR000008 -
Gabi629g00141 994 Gene3D C2 domain 201 338 IPR035892 -
Gabi629g00141 994 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 505 540 IPR001736 GO:0003824
Gabi629g00141 994 Gene3D Endonuclease Chain A 382 622 - -
Gabi629g00141 994 MobiDBLite consensus disorder prediction 144 163 - -
Gabi629g00141 994 MobiDBLite consensus disorder prediction 89 104 - -
Gabi629g00141 994 ProSiteProfiles C2 domain profile. 184 329 IPR000008 -
Gabi629g00141 994 SMART pld_4 505 540 IPR001736 GO:0003824
Gabi629g00141 994 SMART pld_4 840 867 IPR001736 GO:0003824
Gabi629g00141 994 MobiDBLite consensus disorder prediction 1 112 - -
Gabi629g00141 994 FunFam Phospholipase D delta 381 619 - -
Gabi629g00141 994 Pfam Phospholipase D C terminal 914 984 IPR024632 -
Gabi629g00141 994 FunFam Phospholipase D 653 886 - -
Gabi629g00141 994 Pfam Phospholipase D Active site motif 506 540 IPR001736 GO:0003824
Gabi629g00141 994 Gene3D Endonuclease Chain A 653 895 - -
Gabi629g00141 994 Pfam PLD-like domain 691 876 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00141 Gabi-Chr629 1553502 1561914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00141 36 993 Phospholipase D Gene Family (Wang group) AT2G42010 69.011 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00141 K01115 - gmx:100791059 1576.99