Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00113 ATGCCATCTCGTCCGCCGCTATCGCCTCTCTCCGCCGCTCACCGCCACCACAACCACCACCACCAAATAATCCTCGCCGGAGTCATCGCAGCGGCGCTTATCCTCCTTGCCTTGATAATCTCGCTAACGATCTTCCTCTACCGGAAGCTCTCGTACAACCGCACCGCACCCTTCGAGCTCAACCACCGGCGATTCTCCTACACCGAGCTCCGCCGCGCCACGAACTCGTTCTCCCCGTCGACGAAGCTAGGTCACGGAGGGTTCGGTTCGGTTCACAAGGCGACACTACAATCCGGAGAGAGCGTGGCACTTAAGGTTATGGACTCACCGGGCTCGCTTCAAGGAGAGAGAGAGTTTCACAACGAGCTTTCACTCTGTTCGAACATGCGTTCACCTTTTATACTCTCGCTATTGGGGTTTTCATCGGACCGGACCGGTCGAAAGCTGGTTCTGGTTTACGAGCTCATGCCGAACCGGAGTCTCCAGGACGCGCTTTTGGACCGGAGGTGCCCTGAGTTGATGCAATGGGGAAAACGCTTCGACGTCGCCGTTTCGGTTTCGAAGGGGCTTGAGTATCTTCATCACCAGTGTGACCCGCCGGTGATTCACGGTGACATAAAGCCGAGTAATGTTTTGCTGGATCGGGATTTCAAGGCGAAGATTGGGGATTTTGGTCTTGCGAGGGTGAAGACTGTTGTAGAGGATTGTGGAATGGGAATGGTGGAGGAGAAGAAGAAAGATGAGGAGGAGATGGAGGTTGAGGATTGTGGGATTGAAGATCGGGGTTCGGTTTTGGAGGAGGTGGAGAGTGTTGTGACGAATGGTACTACTGCTGGTTTGTCGCCGGAGAGTTGTACGGTGAGGGTTTTGGATTCGGATGCTTCGCCGGAGATTGGGGTTGGGGCGGTGACGTCGCCGCCGGAGATGGTTGGGGTTGATAAATTGAGTGTTGTGTCTGATGGGTGTTTTGATAAGTTGAGTATTGATAGTGGGAATCATAGGAAGAAGGGTGGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAGCAAGAGAGTGGTGGAGGGTCTGAATCTGGGAGGGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGAGACCCAAGAGTGAATGGGTTGAATCTTCTTCTTCCCCTGGCTCTGCAAGGAATAGTGGAGTTGGGGTTGGGGTTGAAGGTGGGACACCACCTAAGGTGGAGGTTGAGCCCAAGAAGAAGCAGAGGAAGAGGTTGGATTGGTGGGCTTCTCTTGATGAAGACAAGGTTAAGGTTAAGGTTAAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGTGAGGAGCTTTCAAAGAAGAGTAAGAAGAAAAAGAGGAGCCTTGATTGTGGTGGGGAATCTTGGTGGCAGAAAGATGAGATTGTGCGGGAGCAGAAGAAGAAGAGGAAGAGTAAGAGTAGCAGAGGGAGCATTGATTGGTGGTTGGATGGTTTGAGTGGTGAGATTAGGAATGGGAATGGAAGGAGGAATAGCCAGGATTGGGTTAATGGAGATAGGGATATACCCAAGAGTGGTGGAATCAGCAGCACCCCAAGTATGAGAGGAACTGTGTGTTACATTGCTCCTGAGTATGGTGGTGGTGGCCAGCTATCTGAGAAGTGTGATGTGTATAGTTTTGGGGTTCTGCTTTTGGTTTTGGTTGCTGGTAGAAGACCCCTTCAAGTAACAGCCTCGCCAATTTCTGAATTTGAGAGGGCCAATCTCATTTCCTGGGCTCGTCAACTTGCTCACAATGGGAGGCTTTTGGATCTTGTTGACCCTTCTATTCATTCATTGGATAAGGAGCAAGCACTGCTCTGCATCACCATTGCCTTGTTGTGTTTGCAGAGATCGCCAGGGAAGAGGCCTTCCATGAAAGAGATTGTGGGCATGCTTTCTGGTGAAGCTGAGCTACCGCACTTGCCCTTTGAGTTCTCACCATCACCGCCCTCTAATTTCCTGTTCAAGTCCCGAAAGAAGGCTCGGTGA 2037 0.516 MPSRPPLSPLSAAHRHHNHHHQIILAGVIAAALILLALIISLTIFLYRKLSYNRTAPFELNHRRFSYTELRRATNSFSPSTKLGHGGFGSVHKATLQSGESVALKVMDSPGSLQGEREFHNELSLCSNMRSPFILSLLGFSSDRTGRKLVLVYELMPNRSLQDALLDRRCPELMQWGKRFDVAVSVSKGLEYLHHQCDPPVIHGDIKPSNVLLDRDFKAKIGDFGLARVKTVVEDCGMGMVEEKKKDEEEMEVEDCGIEDRGSVLEEVESVVTNGTTAGLSPESCTVRVLDSDASPEIGVGAVTSPPEMVGVDKLSVVSDGCFDKLSIDSGNHRKKGGGGSGRDWWWKQESGGGSESGRVKDYVMEWIGSEIKKERPKSEWVESSSSPGSARNSGVGVGVEGGTPPKVEVEPKKKQRKRLDWWASLDEDKVKVKVKKNRKPREWWKEEFCEELSKKSKKKKRSLDCGGESWWQKDEIVREQKKKRKSKSSRGSIDWWLDGLSGEIRNGNGRRNSQDWVNGDRDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDPSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEAELPHLPFEFSPSPPSNFLFKSRKKAR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00113 678 Gene3D Phosphorylase Kinase; domain 1 51 155 - -
Gabi629g00113 678 MobiDBLite consensus disorder prediction 375 415 - -
Gabi629g00113 678 PANTHER OS07G0586332 PROTEIN 7 678 IPR044576 -
Gabi629g00113 678 SMART serkin_6 77 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00113 678 Pfam Protein kinase domain 80 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00113 678 Pfam Protein kinase domain 533 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00113 678 MobiDBLite consensus disorder prediction 329 358 - -
Gabi629g00113 678 SUPERFAMILY Protein kinase-like (PK-like) 52 666 IPR011009 -
Gabi629g00113 678 FunFam Os07g0541700 protein 156 238 - -
Gabi629g00113 678 MobiDBLite consensus disorder prediction 507 530 - -
Gabi629g00113 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gabi629g00113 678 ProSiteProfiles Protein kinase domain profile. 77 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00113 678 Gene3D Transferase(Phosphotransferase) domain 1 156 286 - -
Gabi629g00113 678 Gene3D Transferase(Phosphotransferase) domain 1 513 654 - -
Gabi629g00113 678 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00113 Gabi-Chr629 1205009 1208381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00113 526 648 Receptor kinase-like Gene Family AT3G58690 37.209 4.26e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gabi629g00113 Pkinase 5.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00113 - - aip:107626015 852.047