Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00089 ATGAAAATGCAGGAAGCTTGGTTCTATGAAGAGTATGGTCCTAAGGAAGTCCTTAAGCTGGGGATTTTACCTATTCCTACTCCTCAGCATAACCAACTACTTGTCCAAGTTCATGCTGCTGCTTTGAATCCAATTGATGTCAAGAGGCGTCAATCTCCCATCTTTCCTTCTGACTTTCCAGCGGTTCCTGGCTGTGACATGGCTGGTGTGGTGATAGGAAAAGGTGTTGATGTTACAAAATTTGATATAGGTGATGAGGTTTATGGCAACATCCAAGATTTCAACAATGGGGAAAAACCAAAGCAGCTTGGAACTTTGGCACAGTTCATTGTTGTGGAAGAGAGCTTGGTTTCAAGAAAACCAAAATGCCTTTCATTTGAGGAGGCTGCAAGCTTGCCTTTGGCACTTCAGACAGCAATAGAAGGCTTCACAACTGCAGGTTTTAAGAAGGGCCAGACAATATTTGTGGTTGGTGGAGCAGGTGGGGTTGGAACTTTAGTGGTTCAGCTAGCCAAACACTTCTATGGAGCTTCTTATGTTGTGGCTAGTTGTAGCACCCCAAAACTGGAATTTGTAAAACAGTTAGGTGCTGATAAAGTGGTGGACTATACAAAGACTAAATATGAAGACATTGAGGAGAAATTTGACTTTCTTTATGACACAATTGGTGACTGCAAGAAATCTTTTGTTGTAGCAAAGAATGATGGAGCAATAGTTGACATAACATGGCCTCCATCACATCCAAGAGCAGTTTATTCAAGCTTGACAGTGTCTGGGGAAAGCTTGGAAAAGCTTAGGCCATATTTGGAATGCAAAAAGCTCAAACCTGAAATTGATCCCACAGGTCCATATCATTTTAACGATGTAATTGAGGCTTTCCGATATTTAGAAACTGGAAGAGCTAGGGGAAAAGTTGTTGTCTCTTGCTTCCCTTTGGTGGATCCTCACTCTCCCATTTTATCTAGGGTCAATTCCAAGATAGGAGTTAATGGCCTCTCAGAGGATATTTACATGAAGTAG 1020 0.4176 MKMQEAWFYEEYGPKEVLKLGILPIPTPQHNQLLVQVHAAALNPIDVKRRQSPIFPSDFPAVPGCDMAGVVIGKGVDVTKFDIGDEVYGNIQDFNNGEKPKQLGTLAQFIVVEESLVSRKPKCLSFEEAASLPLALQTAIEGFTTAGFKKGQTIFVVGGAGGVGTLVVQLAKHFYGASYVVASCSTPKLEFVKQLGADKVVDYTKTKYEDIEEKFDFLYDTIGDCKKSFVVAKNDGAIVDITWPPSHPRAVYSSLTVSGESLEKLRPYLECKKLKPEIDPTGPYHFNDVIEAFRYLETGRARGKVVVSCFPLVDPHSPILSRVNSKIGVNGLSEDIYMK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00089 339 SMART PKS_ER_names_mod 13 307 IPR020843 GO:0016491
Gabi629g00089 339 Pfam Alcohol dehydrogenase GroES-like domain 31 90 IPR013154 -
Gabi629g00089 339 CDD MDR_like_2 1 307 - -
Gabi629g00089 339 SUPERFAMILY GroES-like 3 156 IPR011032 -
Gabi629g00089 339 Pfam Zinc-binding dehydrogenase 195 307 - -
Gabi629g00089 339 Gene3D - 11 307 - -
Gabi629g00089 339 Gene3D - 143 258 - -
Gabi629g00089 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 277 IPR036291 -
Gabi629g00089 339 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 309 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00089 Gabi-Chr629 832631 834669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00089 31 222 Monolignol Biosynthesis Gene Families AT3G19450 26.027 6.37e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00089 K18980 - cit:102609064 510.76