Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00085 ATGGGACACACGATGAAAGGTGGCGATGTTGATGAAGAAGAGAAGAAAAGGGTTGTTATGGTTAAGGAAGAGAAGAACTCTTCCCCTGTTGAACTTGATATTGGGGTTGCTGCTATTTCTGCATGCCCCAACAAGTGTTGTCTCTTCACAGAGGCTCAGAAGCGTGAGCTTGACCATCAAGTTCTCATCTTTAACCACTTTGCCTATAACCTTCCTCTTCCTCATCACCTTGTTCAATTCCCAACCAATATGTCAGAATATACTCGCTTTGGTTTTGATTATGGGAGTATGGTGGATCCAGAACCATATAGGTGTAGAAGAACTGATGGTAAGAAATGGAGGTGTGGTAAGAAGGTAGTACCTGATCAGAAATACTGTGAAAGACACATGCATAGAGGTCGTAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGATAACAAAACCTTCTGGCAAGTTACATACCAAAGTAGCATCACACACAGAATCTGCAGTTTCAAATCCAAACCTTTTGGCCATTCAACCTAGTGGCACATCTTCGTGTGCCCCATCAAGGAGCCTCTGTATTGTCAATACCTCTTCAGCTAATGATAATAGATCAAAAAATATCACAGGTTTTTCTGGCTCCACTGTTGCTAGCATGGCATACGTTGCTTCAGATAACAGAAGTTGCTTAGATATATGCAAGAAAGATAACCAGACCAAGAGCTGTATCAGCAACAACATCAGTATTAGAAGTGGTGGGAAAGGAAGCATTATTTATGATAGTAATGGCATCTCTACTGGATTTGGCTTCTCCCCGAAGAGTGTTCTTCAAGGTAATAATGTTTCTGGTTGCAATCATCCATACCTCAATGACAGAAACAGTATAGAACCTGAACCTGGTAGGTGCCGTAGAACAGATGGTAAGAAGTGGCGGTGCAAGAGTGCTGTTCTTCCTGGTCAAAAGTATTGTGCCACACATATGCATAGAGGTGCTAAAAAGCGTTTCACAAACCATGAACCAGCTACTACTACTACTGCTACTTCTACTGTTACCATTGCTAGGTTACCTTACTCTACAGTAGCCACAACCAACATTCAGCAAGCATATTGTAAAATTCCAAATACAAATCTTTCCATGTCAGTACCAGCAAGTGCACCATTCATCCAATGTAATGAGAAAAGTCCTAGCAGCAGTGACACTGATACCACCATCACTGACACCATGAATGAGTGTAGCTATTCTTCTTTCTAA 1251 0.4149 MGHTMKGGDVDEEEKKRVVMVKEEKNSSPVELDIGVAAISACPNKCCLFTEAQKRELDHQVLIFNHFAYNLPLPHHLVQFPTNMSEYTRFGFDYGSMVDPEPYRCRRTDGKKWRCGKKVVPDQKYCERHMHRGRNRSRKPVETSQVNSPLITKPSGKLHTKVASHTESAVSNPNLLAIQPSGTSSCAPSRSLCIVNTSSANDNRSKNITGFSGSTVASMAYVASDNRSCLDICKKDNQTKSCISNNISIRSGGKGSIIYDSNGISTGFGFSPKSVLQGNNVSGCNHPYLNDRNSIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKKRFTNHEPATTTTATSTVTIARLPYSTVATTNIQQAYCKIPNTNLSMSVPASAPFIQCNEKSPSSSDTDTTITDTMNECSYSSF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00085 416 Pfam QLQ 49 80 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi629g00085 416 MobiDBLite consensus disorder prediction 140 156 - -
Gabi629g00085 416 Pfam WRC 100 142 IPR014977 -
Gabi629g00085 416 Pfam WRC 297 336 IPR014977 -
Gabi629g00085 416 ProSiteProfiles WRC domain profile. 296 340 IPR014977 -
Gabi629g00085 416 ProSiteProfiles WRC domain profile. 99 143 IPR014977 -
Gabi629g00085 416 PANTHER GROWTH-REGULATING FACTOR 5 282 394 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi629g00085 416 ProSiteProfiles QLQ domain profile. 48 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi629g00085 416 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00085 Gabi-Chr629 807074 810158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00085 44 351 GRF Transcription Factor Family AT2G45480 33.242 6.08e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi629g00085 WRC 7.5e-21 No_clan