Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00084 ATGGAAGCTAAGCCTCTTCGTATTGTTCCCTCTTCACACAACACTTCTGGGGAAGGAAGTGGTGGACCCCAGAAGAAGATTGACATGGGACACACGATGAAAGGTGGCGATGTTGATGAAGAAGAGAAGAAAAGGGTTGTTATGGTTAAGGAAGAGAAGAACTCTTCCCCTGTTGAACTTGATATTGGGGTTGCTGCTATTTCTGCATGCCCCAACAAGTGTTGTCTCTTCACAGAGGCTCAGAAGCGTGAGCTTGACCATCAAGTTCTCATCTTTAACCACTTTGCCTATAACCTTCCTCTTCCTCATCACCTTGTTCAATTCCCAACCAATATGTCAGAATATACTCGCTTTGGTTTTGATTATGGGAGTATGGTGGATCCAGAACCATATAGGTGTAGAAGAACTGATGGTAAGAAATGGAGGTGTGGTAAGAAGGTAGTACCTGATCAGAAATACTGTGAAAGACACATGCATAGAGGTCGTAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGATAACAAAACCTTCTGGCAAGTTACATACCAAAGTAGCATCACACACAGAATCTGCAGTTTCAAATCCAAACCTTTTGGCCATTCAACCTAGTGGCACATCTTCGTGTGCCCCATCAAGGAGCCTCTGTATTGTCAATACCTCTTCAGCTAATGATAATAGATCAAAAAATATCACAGGTTTTTCTGGCTCCACTGTTGCTAGCATGGCATACGTTGCTTCAGATAACAGAAGTTGCTTAGATATATGCAAGAAAGATAACCAGACCAAGAGCTGTATCAGCAACAACATCAGTATTAGAAGTGGTGGGAAAGGAAGCATTATTTATGATAGTAATGGCATCTCTACTGGATTTGGCTTCTCCCCGAAGAGTGTTCTTCAAGTTTCTGGTTGCAATCATCCATACCTCAATGACAGAAACAGTATAGAACCTGAACCTGGTAGGTGCCGTAGAACAGATGGTAAGAAGTGGCGGTGCAAGAGTGCTGTTCTTCCTGGTCAAAAGTATTGTGCCACACATATGCATAGAGGTGCTAAAAAGCGTTTCACAAACCATGAACCAGCTACTACTACTACTGCTACTTCTACTGTTACCATTGCTAGGTTACCTTACTCTACAGTAGCCACAACCAACATTCAGCAAGCATATTGTAAAATTCCAAATACAAATCTTTCCATGTCAGTACCAGCAAGTGCACCATTCATCCAATGTAATGAGAAAAGTCCTAGCAGCAGTGACACTGATACCACCATCACTGACACCATGAATGAGTGTAGCTATTCTTCTTTCTAA 1326 0.4208 MEAKPLRIVPSSHNTSGEGSGGPQKKIDMGHTMKGGDVDEEEKKRVVMVKEEKNSSPVELDIGVAAISACPNKCCLFTEAQKRELDHQVLIFNHFAYNLPLPHHLVQFPTNMSEYTRFGFDYGSMVDPEPYRCRRTDGKKWRCGKKVVPDQKYCERHMHRGRNRSRKPVETSQVNSPLITKPSGKLHTKVASHTESAVSNPNLLAIQPSGTSSCAPSRSLCIVNTSSANDNRSKNITGFSGSTVASMAYVASDNRSCLDICKKDNQTKSCISNNISIRSGGKGSIIYDSNGISTGFGFSPKSVLQVSGCNHPYLNDRNSIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKKRFTNHEPATTTTATSTVTIARLPYSTVATTNIQQAYCKIPNTNLSMSVPASAPFIQCNEKSPSSSDTDTTITDTMNECSYSSF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00084 441 PANTHER GROWTH-REGULATING FACTOR 5 309 419 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi629g00084 441 MobiDBLite consensus disorder prediction 1 37 - -
Gabi629g00084 441 MobiDBLite consensus disorder prediction 160 185 - -
Gabi629g00084 441 Pfam WRC 322 361 IPR014977 -
Gabi629g00084 441 Pfam WRC 128 170 IPR014977 -
Gabi629g00084 441 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi629g00084 441 MobiDBLite consensus disorder prediction 168 185 - -
Gabi629g00084 441 ProSiteProfiles WRC domain profile. 321 365 IPR014977 -
Gabi629g00084 441 ProSiteProfiles WRC domain profile. 127 171 IPR014977 -
Gabi629g00084 441 Pfam QLQ 77 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00084 Gabi-Chr629 807036 810158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00084 72 376 GRF Transcription Factor Family AT2G45480 33.518 9.82e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi629g00084 WRC 8.2e-21 No_clan