Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00083 ATGGAAGCTAAGCCTCTTCGTATTGTTCCCTCTTCACACAACACTTCTGGGGAAGGAAGTGGTGGACCCCAGAAGAAGATTGACATGGGACACACGATGAAAGGTGGCGATGTTGATGAAGAAGAGAAGAAAAGGGTTGTTATGGTTAAGGAAGAGAAGAACTCTTCCCCTGTTGAACTTGATATTGGGGTTGCTGCTATTTCTGCATGCCCCAACAAGTGTTGTCTCTTCACAGAGGCTCAGAAGCGTGAGCTTGACCATCAAGTTCTCATCTTTAACCACTTTGCCTATAACCTTCCTCTTCCTCATCACCTTGTTCAATTCCCAACCAATATGTCAGAATATACTCGCTTTGGTTTTGATTATGGGAGTATGGTGGATCCAGAACCATATAGGTGTAGAAGAACTGATGGTAAGAAATGGAGGTGTGGTAAGAAGGTAGTACCTGATCAGAAATACTGTGAAAGACACATGCATAGAGGTCGTAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGATAACAAAACCTTCTGGCAAGTTACATACCAAAGTAGCATCACACACAGAATCTGCAGTTTCAAATCCAAACCTTTTGGCCATTCAACCTAGTGGCACATCTTCGTGTGCCCCATCAAGGAGCCTCTGTATTGTCAATACCTCTTCAGCTAATGATAATAGATCAAAAAATATCACAGGTTTTTCTGGCTCCACTGTTGCTAGCATGGCATACGTTGCTTCAGATAACAGAAGTTGCTTAGATATATGCAAGAAAGATAACCAGACCAAGAGCTGTATCAGCAACAACATCAGTATTAGAAGTGGTGGGAAAGGAAGCATTATTTATGATAGTAATGGCATCTCTACTGGATTTGGCTTCTCCCCGAAGAGTGTTCTTCAAGGTAATAATGTTTCTGGTTGCAATCATCCATACCTCAATGACAGAAACAGTATAGAACCTGAACCTGGTAGGTGCCGTAGAACAGATGGTAAGAAGTGGCGGTGCAAGAGTGCTGTTCTTCCTGGTCAAAAGTATTGTGCCACACATATGCATAGAGGTGCTAAAAAGCGTTTCACAAACCATGAACCAGCTACTACTACTACTGCTACTTCTACTGTTACCATTGCTAGGTTACCTTACTCTACAGTAGCCACAACCAACATTCAGCAAGCATATTGTAAAATTCCAAATACAAATCTTTCCATGTCAGTACCAGCAAGTGCACCATTCATCCAATGTAATGAGAAAAGTCCTAGCAGCAGTGACACTGATACCACCATCACTGACACCATGAATGAGTGTAGCTATTCTTCTTTCTAA 1335 0.4195 MEAKPLRIVPSSHNTSGEGSGGPQKKIDMGHTMKGGDVDEEEKKRVVMVKEEKNSSPVELDIGVAAISACPNKCCLFTEAQKRELDHQVLIFNHFAYNLPLPHHLVQFPTNMSEYTRFGFDYGSMVDPEPYRCRRTDGKKWRCGKKVVPDQKYCERHMHRGRNRSRKPVETSQVNSPLITKPSGKLHTKVASHTESAVSNPNLLAIQPSGTSSCAPSRSLCIVNTSSANDNRSKNITGFSGSTVASMAYVASDNRSCLDICKKDNQTKSCISNNISIRSGGKGSIIYDSNGISTGFGFSPKSVLQGNNVSGCNHPYLNDRNSIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKKRFTNHEPATTTTATSTVTIARLPYSTVATTNIQQAYCKIPNTNLSMSVPASAPFIQCNEKSPSSSDTDTTITDTMNECSYSSF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00083 444 MobiDBLite consensus disorder prediction 1 37 - -
Gabi629g00083 444 Pfam WRC 128 170 IPR014977 -
Gabi629g00083 444 Pfam WRC 325 364 IPR014977 -
Gabi629g00083 444 PANTHER GROWTH-REGULATING FACTOR 5 310 422 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi629g00083 444 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi629g00083 444 MobiDBLite consensus disorder prediction 168 184 - -
Gabi629g00083 444 Pfam QLQ 77 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi629g00083 444 ProSiteProfiles WRC domain profile. 127 171 IPR014977 -
Gabi629g00083 444 MobiDBLite consensus disorder prediction 160 184 - -
Gabi629g00083 444 ProSiteProfiles WRC domain profile. 324 368 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00083 Gabi-Chr629 807036 810158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00083 72 379 GRF Transcription Factor Family AT2G45480 33.242 7.68e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi629g00083 WRC 8.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00083 - - gmx:100795050 577.785