Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00076 ATGGCTTCGAACGTTCACCGAAACGGCGTCGCTCAAGCTCAAAGGGGAAGCACCAAGTTGGATCGCCCAAACCACCTCAGAACGGCGTCGCTCAAGCCACGTCAAGTTGGATCCGCCCTCCGCCGCAGCAGCCCCGGCTCTCTCGCCGCTCGAAACGGAGACGGAGTGCCTGGAAGGGTTCGAGTGGCTGTAAGATTGAGACCTCGAAATACGGAAGAAATGATGGCTGATGCTGATTTTGCTGACTGTGTTGAATTACAACCCGAGCTTAAAAGGCTGAAACTTCGGAGAAACAATTGGGATTCAGACACTTTTGAGTTTGATGAAGTGCTTACTGAATTTTCATCCCAAAAGCGTGTTTATGAAGTTGTAGCTAAGCCAGTTGTCGAGAGCGTTCTTGATGGTTATAATGGAACTGTGATGGCTTATGGTCAAACTGGAACGGGGAAAACTTTTACTCTAGGACGATTGGGGGAAGAAGACACCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTAGCCGACCTATCTCCTGAAACTGATTCTGTCACTGTCTCATATCTGCAGCTTTACATGGAGACTCTTCAGGACTTGCTTAATCCAGCAAATGATAATATTCCCATAGTGGAAGATCCAAGAACTGGTGATGTGTCTTTGCCTGGGGCAACTCTTATAGAAATCAGGGATCAGCAAAGTTTCTTGGAGTTGCTGAGAATAGGAGAAGCTCATCGAGTTGCTGCTAACACAAAGTTGAATACTGAATCTTCCCGTAGTCATGCTATACTGACGGTACATGTTAAGAGGTCTGTCGTGGAAAGTGAAGATATTGTTTCTACTGAGAATAATGATACCTCTCACTTGACTAAACCCGCAAAACCACTTCTTCGAAAGAGCAAGCTGGTTGTGGTAGATTTGGCAGGATCAGAGCGTGTCCATAAGTCTGGAAGTGAAGGGCACATGCTAGAGGAGGCTAAATGTATCAATCTCTCACTTAGTGCACTGGGAAAATGTATTAATGCTCTAGCAGAAAACAGTGCTCATGTTCCATTTCGTGATTCAAAGCTTACTAGGTTGCTCAGAGATTCCTTTGGAGGAACAGCGAGGACTTCATTGATTGTGACTATTGGCCCATCTCCACGTCATCGTGGAGAGACTTCTAGCACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTTTGTCTCGGAAGCTTGAGGTACAATTAGATAAACTTATTGCAGAAAATGAACGGCAGCAGAAAGCTTATGAGGATGAAGTTGAAAGAATAAATTTGGAGGCACAATGTCGTATTGCTGAGGTTGAGAGGAACTTTGCGGATGCATTAGAGAGAGAGAGATTGAAATGCCAGATGGAGTACATGGAATCAGTTAAGCAGCTGGAGCAGAAGTTGGTGTCAAGTCAAGAAAGACATGGCTGCAATTATTTTGAGGATGGGTGTGGAGAGGGGCCTACACTATCTTCTGCAGATGAAATTGCTGAGGTCAAAAAGCTGTTTGAAAATGAAAGCGATAGGAGAAAGGCAGCTGAAGCAGAGGTAGAATATCTAAAAAGTCAGCTGGGAAGAAATACACAAGCAGAGGCAGGAGGTGATGCAGAGATTATAAAGCTTCGCAGCATCCTGGAGGATGAGGCTAATCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGGTGTTTAGAAAGTGAAAGCTCTGTAAATGCATTCCCTGCCGTGGATTCTTCCATGTCTCAAGTTAGGCATTCTCAACTGAAAGAAGCTGGGAATGGTCAGAAGTCATCTGTTGCTGCACTCTTTGAGCAAGTTGGATTGCAAAAGATATTGTCGTTGCTGGAGTCAGATGATGCAAATGTTCGAATTCATGCTGTAAAAGTGGTGGCCAACCTAGCTGCTGAAGAGGAAAATCAAAAAAGTATTGTTGAAGCCGGTGGTCTTTCTTCCTTGCTGATGCTTCTTAGAAGATACGAGGATGAAACTGTTCGCAGAGTAGCAGCTGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCTGAAGGGGGAATCACTCTGTTATCGATGACTGCATCTGATGCTGAAGAACCACAAACTCTTCGAATGGTTGCTGGGGCTATTGCTAACCTATGTGGAAATGATAAAATATTGATGAAGCTGAGATCCCAGGGAGGTATTAAGGCTTTACTGGGAATTGTAAGATGTGGACATCCTGATGTTCTTTCACAAGTTGCACGAGGAATTGCCAACTATGCTAAATGCGAGTCTCGGGCTTCAAATGAAGGGATAAAAAGTGGCAAATCTTTTTTGATAGAAGATGGAGCACTTCCATGGATGGTACAAAATGCTAATAATGAAGCTGCGCCAATCAGGCGTCACATTGAACTTGCACTCTGCCACTTGGCACGGCATGAAGTGAATGCAAAAGACATGATCAGTGGAGGTGCCCTTTGGGAGCTTGTTCGGATTTCAAGGGATTGTACGCGAGAGGACATAAGGAACCTTGCTCGTAGGACTCTCAGTTCTATCCCGACATTCAAATCTGAATTGAGGCGATTACGTATAGACTATTGA 2697 0.4383 MASNVHRNGVAQAQRGSTKLDRPNHLRTASLKPRQVGSALRRSSPGSLAARNGDGVPGRVRVAVRLRPRNTEEMMADADFADCVELQPELKRLKLRRNNWDSDTFEFDEVLTEFSSQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEEDTSDRGIMVRSMEDILADLSPETDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATLIEIRDQQSFLELLRIGEAHRVAANTKLNTESSRSHAILTVHVKRSVVESEDIVSTENNDTSHLTKPAKPLLRKSKLVVVDLAGSERVHKSGSEGHMLEEAKCINLSLSALGKCINALAENSAHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAYEDEVERINLEAQCRIAEVERNFADALERERLKCQMEYMESVKQLEQKLVSSQERHGCNYFEDGCGEGPTLSSADEIAEVKKLFENESDRRKAAEAEVEYLKSQLGRNTQAEAGGDAEIIKLRSILEDEANQKKKLEEEIIILRSQLLQLNFEADQMRRCLESESSVNAFPAVDSSMSQVRHSQLKEAGNGQKSSVAALFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEENQKSIVEAGGLSSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEEPQTLRMVAGAIANLCGNDKILMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANYAKCESRASNEGIKSGKSFLIEDGALPWMVQNANNEAAPIRRHIELALCHLARHEVNAKDMISGGALWELVRISRDCTREDIRNLARRTLSSIPTFKSELRRLRIDY 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00076 898 ProSiteProfiles Kinesin motor domain profile. 59 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi629g00076 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 682 IPR000225 GO:0005515
Gabi629g00076 898 Coils Coil 514 541 - -
Gabi629g00076 898 Gene3D - 731 895 IPR011989 -
Gabi629g00076 898 FunFam Kinesin-like protein 51 431 - -
Gabi629g00076 898 Coils Coil 417 466 - -
Gabi629g00076 898 ProSitePatterns Kinesin motor domain signature. 301 312 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi629g00076 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 681 724 IPR000225 GO:0005515
Gabi629g00076 898 SMART arm_5 712 753 IPR000225 GO:0005515
Gabi629g00076 898 SMART arm_5 630 669 IPR000225 GO:0005515
Gabi629g00076 898 SMART arm_5 754 794 IPR000225 GO:0005515
Gabi629g00076 898 SMART arm_5 670 711 IPR000225 GO:0005515
Gabi629g00076 898 SUPERFAMILY ARM repeat 630 885 IPR016024 -
Gabi629g00076 898 MobiDBLite consensus disorder prediction 1 19 - -
Gabi629g00076 898 FunFam Kinesin-like protein 619 801 - -
Gabi629g00076 898 Coils Coil 556 590 - -
Gabi629g00076 898 Pfam Kinesin motor domain 65 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi629g00076 898 Gene3D Kinesin motor domain 54 431 IPR036961 -
Gabi629g00076 898 Pfam Armadillo/beta-catenin-like repeat 672 710 IPR000225 GO:0005515
Gabi629g00076 898 Gene3D - 620 730 IPR011989 -
Gabi629g00076 898 PRINTS Kinesin heavy chain signature 351 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi629g00076 898 PRINTS Kinesin heavy chain signature 135 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi629g00076 898 PRINTS Kinesin heavy chain signature 302 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi629g00076 898 Coils Coil 472 492 - -
Gabi629g00076 898 CDD KISc 59 399 - -
Gabi629g00076 898 PANTHER CENTROMERE PROTEIN E 59 630 IPR027640 GO:0003777|GO:0007018
Gabi629g00076 898 MobiDBLite consensus disorder prediction 1 55 - -
Gabi629g00076 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 438 IPR027417 -
Gabi629g00076 898 SMART kinesin_4 57 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00076 Gabi-Chr629 732210 754980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00076 54 448 Calmodulin-binding Proteins AT5G65930 33.981 7.81e-46 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00076 - K10396 gmx:100793472 1512.28