Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00075 ATGTATCTTTCAAAGGGTTGTAGGTGTGAAGTTGTTCTCTGCTTGTGGTTCTGTTGCTATTTGCTTCTCGCTGTTGGTCAGACTGACCCCACTGAAGTTGACGCATTGAGAACCATAAAGGAAAGTTTGATTGATGTTAATGGAAATTTGAGCAGCTGGAGTAACGGAGACCCATGTACATCTAATTGGACAGGGGTTTTGTGCTCCAGTACGACATTAGTCGATGGCTATCTACATGTTCAACAATTGCAACTACCGAACTTGAACTTGTCTGGAACTTTGGCCCCAGAGATTGGGCGCTTATCTTATCTGGAGATAATGGACTTTATGTGGAACAACATAAGTGGGAGTATACCGAAGGAAATTGGCAATATCAAAACTTTGAAACTCTTGCTCCTGAGTGGAAATCATTTAAGAGGTCTGTTGCCAGAAGAGCTTGGCTATCTTCCAGTCCTGGACAGAATGCAAATCGATCAGAACAATATTACAGGATCTATTCCTTCATCATTTGCAAACCTGAACAGCACACAGCACTTTCACATGAACAATAATTCACTCAGTGGACAAATCCCACCAAAGCTTTCTCGCTTAGGAAGCCTACTTCACCTTCTTCTTGACAACAACAAGTTATCAGGATATCTCCCCTCGGAGCTCTCTGAGATGCCAAGCTTAAAGATACTTCAACTTGACAACAATAATTTTGGTGGAAACAGCATTCCAGATTCTTATGTCAACATGTCAAAATTGTTGAAATTGAGCCTTAGGAACTGCAACTTGCAAGGACCGATTCCTGATTTAAGCAGGATACCAGACCTTGGTTATCTCGACCTCAGTTTCAATCAGTTGAATGAATCAATTCTTTCTAAGAAGCTTTCTGAAAATATCACTACCATTGATTTATCAAACAACAAGCTTACTGGAACTATTCCATCCTACTTTTCTGGTCTGCCACATCTTCAGAAATTGTCACTTGCAAACAATTCATTGAGTGGCAATATTCCTTCTAACATTTGGCAGAACAAGACTAATGCAACAGAAATGCTTCTCCTGGACATGCAAAATAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACAGTCTTGTATGCTTCTAAACTTATATTGCAGTCTATACTGAAATCAGGGCTTGAGGGAAATCCTCTATGCTCAAATAATAACACCTTAGTTCAGTTCTGTGGAGCTGGAAGTGACAATGGCGTGAACAGTAGCTCCAGTGTCAGCTGTCCTAGTCAGGCATGCCCTCCTCCTTATGAATACAATGTGGAGTGTTTCTGTGCAGCCCCATTGATCATTGATTATCGGTTGAAAAGTCCAGGATTTTCAGATTTCCGTACTTACGTGGATGCATTTGAGAGCTTCCTGACAGATAGTCTTAACATACATATTAATCAGCTATTCATTAATAGTTTTGCATGGGAAGAAGGGCCTCGGTTGAGAATGTACTTGAAGCTTTTTCCTATATATGTTGACAATAGAAGCTCTCATATTTTCAATACAAGTGAGGTTTTTCGAATCAGAAACTTGTTCAGAGAGTGGACTATTCAAGACAGTGACTTGTTCGGGCCTTATGAACTTATAGACTTCATTCTCCTGGATCCTTACAGGGATGTGATTATCACTTCTCCAAGTTCAGGGATAAGCAAGGGTGCACTGGCTGGAATAGTTTTAGGTGCAATTGCAGGTGCAGTCACATTATCTGCAATTGTTTCCATTCTAATATTGAGAATACGCTTGAGAGATTACCGTGTGCTTTCCAGACGGCGTAATGCATCTAGGATCTCAATGAAATTTGATGGTGTAAGATCATTTGATTATGAAGAAATGGCCTTGGCTACAAACAATTTTAGTGACTCCGCAGAAGTTGGACAAGGGGGGTATGGAAAGGTTTATAAAGGTATTCTTTCTGATGGCACTCTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAGATGGAGTTCCGTACAGAAATACATTTGCTATCAAGGGTACATCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAAAGGGTGAACAGATGCTGGTTTATGAATACATGCCCAATGGAACGCTGAGGGATCATCTTTCTGTTCATTCAAAAGAACCTCTTAGTTTTCCCATGAGATTGAAGATGGCTATAGGGTCAGCTAAAGGTCTTCTGTATCTACACACAGAAGCTGATCCTCCAATATTCCACCGGGATGTCAAGGCGAGCAATATATTGTTGGACTCTAAGTTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCCCCGGTTCCAGATATTGAAGGAAATCTTCCTGGTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTGTGACAGGGAGGCCACCAATATTTCATGGTGAAAATATTATTAGACAGGTTACTGTGGCGTTCCAATCTGGTGGAATCTTTTCGGTTGTTGATAAACGTATGGGGTCTTATCCTTCTGAGTGTTTGGGGAAATTTTTGACTTTGGCCTTAAAGTGTTGCGAAAATGCACCAGATGAACGGCCAAAAATGGCAGAAGTGGTTAGGGAGCTTGAAAACATCTGGTCTATGATATCTGAGTCCGATGCCAAGGGAGTTGAATATGTGGCAAGTGATTCTGGAACAATATTCAGTTCACCACATTCATCATCTACTCTAAAGACTCATTTAATTTCAGGAGATGTGTCGGGTAGTGACCTTGTTAGTGGAGATATACCAAGCATCAAGCCAAGATAG 2871 0.4107 MYLSKGCRCEVVLCLWFCCYLLLAVGQTDPTEVDALRTIKESLIDVNGNLSSWSNGDPCTSNWTGVLCSSTTLVDGYLHVQQLQLPNLNLSGTLAPEIGRLSYLEIMDFMWNNISGSIPKEIGNIKTLKLLLLSGNHLRGLLPEELGYLPVLDRMQIDQNNITGSIPSSFANLNSTQHFHMNNNSLSGQIPPKLSRLGSLLHLLLDNNKLSGYLPSELSEMPSLKILQLDNNNFGGNSIPDSYVNMSKLLKLSLRNCNLQGPIPDLSRIPDLGYLDLSFNQLNESILSKKLSENITTIDLSNNKLTGTIPSYFSGLPHLQKLSLANNSLSGNIPSNIWQNKTNATEMLLLDMQNNQLTSISGSTNLPPNVTVLYASKLILQSILKSGLEGNPLCSNNNTLVQFCGAGSDNGVNSSSSVSCPSQACPPPYEYNVECFCAAPLIIDYRLKSPGFSDFRTYVDAFESFLTDSLNIHINQLFINSFAWEEGPRLRMYLKLFPIYVDNRSSHIFNTSEVFRIRNLFREWTIQDSDLFGPYELIDFILLDPYRDVIITSPSSGISKGALAGIVLGAIAGAVTLSAIVSILILRIRLRDYRVLSRRRNASRISMKFDGVRSFDYEEMALATNNFSDSAEVGQGGYGKVYKGILSDGTLVAIKRAQEGSLQGEMEFRTEIHLLSRVHHRNLVSLIGYCDEKGEQMLVYEYMPNGTLRDHLSVHSKEPLSFPMRLKMAIGSAKGLLYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDIEGNLPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELVTGRPPIFHGENIIRQVTVAFQSGGIFSVVDKRMGSYPSECLGKFLTLALKCCENAPDERPKMAEVVRELENIWSMISESDAKGVEYVASDSGTIFSSPHSSSTLKTHLISGDVSGSDLVSGDIPSIKPR 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00075 956 Gene3D Transferase(Phosphotransferase) domain 1 703 917 - -
Gabi629g00075 956 SUPERFAMILY L domain-like 42 394 - -
Gabi629g00075 956 Gene3D Ribonuclease Inhibitor 29 289 IPR032675 -
Gabi629g00075 956 SMART LRR_typ_2 197 220 IPR003591 -
Gabi629g00075 956 SMART LRR_typ_2 269 294 IPR003591 -
Gabi629g00075 956 SMART LRR_typ_2 221 246 IPR003591 -
Gabi629g00075 956 SMART LRR_typ_2 316 340 IPR003591 -
Gabi629g00075 956 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Gabi629g00075 956 SMART serkin_6 627 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00075 956 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 30 191 - -
Gabi629g00075 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Gabi629g00075 956 Gene3D Phosphorylase Kinase; domain 1 598 702 - -
Gabi629g00075 956 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Gabi629g00075 956 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 703 912 - -
Gabi629g00075 956 SUPERFAMILY Protein kinase-like (PK-like) 612 904 IPR011009 -
Gabi629g00075 956 FunFam Leucine-rich repeat protein kinase family protein 592 702 - -
Gabi629g00075 956 PANTHER RECEPTOR-LIKE PROTEIN 55 39 901 - -
Gabi629g00075 956 Pfam Protein kinase domain 628 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00075 956 ProSiteProfiles Protein kinase domain profile. 627 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00075 956 Pfam Leucine rich repeat 294 331 IPR001611 GO:0005515
Gabi629g00075 956 Gene3D Ribonuclease Inhibitor 290 426 IPR032675 -
Gabi629g00075 956 CDD STKc_IRAK 633 899 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00075 Gabi-Chr629 700557 715311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00075 18 899 Receptor kinase-like Gene Family AT5G01950 56.856 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gabi629g00075 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00075 - - gmx:100801035 1398.26