Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00071 ATGGATGACCATTCGGACTACAATGACTTAAATGATGAAATTAGGAATGACATGCCTGGTGAATTGGGAGATGACTTATTGAATATGGATGATGATCCAATAGATTACATCAACTTCAGTGATGATGAAATTATAGAAGAGATGCCTACTCATTTAGGAGATGACATATCGAATGATTTAATTGATAACATTCCAAATGTCGTTCCCTTGACACCGACAAAGAATTCTAATATTTTTATTGAGGTTGGAATGGAATTTTCCGAACAAAAGGGTGTAGTGGACTTGTATACAGCGTATAACAAGGTAAAAGGTTTCGGAATCCGAATACGAACAAGGAGGGACAACTTCGTCAAGCTAGTTTGTGCTAGACAGGGTCATCCACAAAAAAAAAATGATAAAGATGTTGCTCAAGTTTGTCAGACCAAATTAAAGAAGACATCATCATTACGAATTGGGTGTGAAGCTAGTGTAAATGCTTATAAGAGTGAAAACACAAAAATGTGGAGAATTACACTATTTGACGACAACCATAATCATGGTCTTGTGACTCCAAAGAGTGTTCGTTATCTCAGATCACACAGAAAAATGTCTAATGCTGCAAGATCGTTGGTTGAACACTTTAGTGATGCAAGCTTGCCCACAGGAAAAGTGGCTACCATCTTCAAAGGCGATGAGTTATCATTTGACAGTCGAGATTGTTATAACCATCTAAAAAGTGTGAGGAGAAGAATATATAACACAGGAGATGCACAAGCTGTGTTAAACTATTGTGCTAAACAACAATCATTGAATCCAAATTTCTCTTATTCCATTAAATGTGACGATGAAGATCGCATGGAAAGCTTTTTTTGGATTGATGCAAGGTCCAGGAAAGCTTATGAGCTTTTTGGTGATGTCATCACATTTGACACGACATATAGAACTAATAAGTATTCAATGCCATTTGGACCTTTTGTTGGTGTAAATAATCATTTACAGTCAATCTTGTTCGGATGTGCTTTATTGAAAGACGAAACAGAAGATACTTTTATTTGGCTATTTAAGGAATGGCTTCGAGGAATGAATGGGAAACATCCGGGCGCCATAATTACTGATCAGAGCACTCAAGATTTTGAAGACAAATGGCAACGTATTCTTGATCACTATGGTCTTCATGAGAATGAGTGGTTGCAGTCACTTTATTCAATTAAAGCGTCTTGGATACCAATCTTTAACAGATCTATTTTCTTTGCTGGTATGAACACCACTCAGCATAGTGAAAGCATCAATTCATTCTTTGATGGTTTTGTTACATCTGGCACAACCTTAAAGGAATTTGTAGAAAAATATAATCAAGCAGTAGATGCTCGTTATGACTCATTCAAAAAACAAGACTTTGAATCTAGGCACAAAGAAAGGCGTTTAACATTGAATATGCCATTGGAAGAACATGCAGCCAAGGTTTACACGCGTGCAATTTTCACAAAGTTTAGTGATGTGCTTTCTCATAATTTTCGTCTGTCTAAGGAGAAAATTGGAGATGATGGTGAGTGGGTTACTTATCGAGTTTTTAATAGGAAAGAGAAGGATTATTCTGCAACTGTGAAGATGAAGTTGGAAAATAAAGAAGCAAGATGTTCTTGTCAGTATTTTGAGTTCATGGGAATCCCATGTGAGCATATTATTTCTATTTTTTTGGTTGAAAATGTTGAGCAGATCCCTGAACATATGATTTTGCGACGCTGGAGCAAAGAAAAAAATGATATAATTAGTACAAATAAATACATTTGTACTTTTGATGGAGAGGGACTCCTTCGCGGCTTTGAAATACGCTCTAGAGTTTCAAAACTTATTGAGCTTGCAGATAGGTCCAATGAAGCAGCTAGATTCGCTTGTGATGGTCTTGATTCTCTCACTGAATCTTTAGAAAAATTTCCAAGACCTGATGATAGTATTGGTCTTGAGGATTTTGATTCACATTACTTGAGTTCTCAAGCTGAAGAGTCATCTATGATGTGA 1998 0.3634 MDDHSDYNDLNDEIRNDMPGELGDDLLNMDDDPIDYINFSDDEIIEEMPTHLGDDISNDLIDNIPNVVPLTPTKNSNIFIEVGMEFSEQKGVVDLYTAYNKVKGFGIRIRTRRDNFVKLVCARQGHPQKKNDKDVAQVCQTKLKKTSSLRIGCEASVNAYKSENTKMWRITLFDDNHNHGLVTPKSVRYLRSHRKMSNAARSLVEHFSDASLPTGKVATIFKGDELSFDSRDCYNHLKSVRRRIYNTGDAQAVLNYCAKQQSLNPNFSYSIKCDDEDRMESFFWIDARSRKAYELFGDVITFDTTYRTNKYSMPFGPFVGVNNHLQSILFGCALLKDETEDTFIWLFKEWLRGMNGKHPGAIITDQSTQDFEDKWQRILDHYGLHENEWLQSLYSIKASWIPIFNRSIFFAGMNTTQHSESINSFFDGFVTSGTTLKEFVEKYNQAVDARYDSFKKQDFESRHKERRLTLNMPLEEHAAKVYTRAIFTKFSDVLSHNFRLSKEKIGDDGEWVTYRVFNRKEKDYSATVKMKLENKEARCSCQYFEFMGIPCEHIISIFLVENVEQIPEHMILRRWSKEKNDIISTNKYICTFDGEGLLRGFEIRSRVSKLIELADRSNEAARFACDGLDSLTESLEKFPRPDDSIGLEDFDSHYLSSQAEESSMM 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00071 665 MobiDBLite consensus disorder prediction 1 21 - -
Gabi629g00071 665 SMART 26again6 537 564 IPR006564 GO:0008270
Gabi629g00071 665 MobiDBLite consensus disorder prediction 1 20 - -
Gabi629g00071 665 Pfam SWIM zinc finger 533 559 IPR007527 GO:0008270
Gabi629g00071 665 Pfam MULE transposase domain 299 368 IPR018289 -
Gabi629g00071 665 ProSiteProfiles Zinc finger SWIM-type profile. 524 562 IPR007527 GO:0008270
Gabi629g00071 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 635 IPR031052 GO:0006355
Gabi629g00071 665 Pfam FAR1 DNA-binding domain 95 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00071 Gabi-Chr629 678702 680940 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi629g00071 FAR1 9.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00071 - - vvo:131633311 540.806