Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00067 ATGCTTGCTGCTGTTACTTGTGCGTCTAGGCACCTTCTTCAAATCGATGCCAGACCCACCATTGGTAGTGGTAGTGGCAATCGAGTTCGCTCGCTTTTAAGTGCTTCTGGCATCACCACCACCTCCTCAATTCGCACTACAAGATGTTACGGTTACGGTTATGGAATCAGTTTGAATCACCGCCAACCCAAAACATGCCCAAGTTTACTTTTTGCTATAAAGGGGTTTCTCTCTGATTCATCACCTTCTTCTTCTTCGCAACAGAGTTCAACGGTAGATGGGCGAGCGTTGTTCTCAACATCAACTAAAACTGATGATGGAACCCAGAAACAAAAGACAGCTTCTACCATTGCTAAATCACCTCCTGGGGAACAAGTCGCTGATATGAAGATCCTTCGTACACTTGCCAGTTACTTGTGGATGAGAGATAACCTCGAATTTCGGTTTCGGGTTTTTGCTGCATTGGGTTTACTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTCAAGATTGCAGTTGATTGGTTGACGACTGCCACCGGCAATGCTGGTGCTTTTGCTTCTAATTCAACTGCGCTGGCTCTTTTTGCAACCCCGGTGGCTGTGTTGGTTGGATATGGGATTGCACGTACTGGAGCTTCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTAGCACTGCGAACGATTCGATTAGTATCCAGGAAGGTCTTCTCACACTTGCATGATCTTGACCTTCGGTATCATCTAAGTCGAGAAACTGGTGCGTTAAGTAGAATAATTGATCGTGGTAGCCGTGCAATAAATTTCATTCTCTCCGCTATGGTTTTCAATGTAGTACCCACCATATTGGAGATATCTATGGTATCAGGTATACTGGCCTACAAATTCGGAGCTCCTTTTGCGTTAATTACATCCCTATCAGTTGCTGCTTATGTTATTTTTACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAAAGTCATGAATAAGGCTGATAATGATGCTAGTACAAGGGCTGTTGATTCGCTTATTAACTATGAGACTGTCAAATATTTCAATAATGAAGTTTATGAAGCTGAAAAATATGATGAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACACAACACAGTCTTGCTTTGTTGAACTTTGGTCAAAATATTATATTTAGTACTGCTCTTTCAACAGCAATGGTGCTGTGTTCTCATGGTATCATGGATGGCACAATGACTGTTGGCGATTTGGTGATGGTGAATGGGCTTCTCTTCCAGCTATCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTCTAATTGACATGAAGTCCATGTTTCAGTTACTTGAGGAAAGAGCAGACATCAAGGATAAAGACAATGCAATACCTCTGAGATTTAATGGGGGTAACATCCAATTTGAGAATGTACATTTCGGTTACCTCACAGAAAGAAAGATACTAGATGGAGTATCACTTGTTGTGCCGGCTGGTAAAAGTGTGGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCGTACTTAGATTGCTATTCAGGTTTTTTGATCCTCAATCTGGAAGTATAATGATAGATGGTCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCTATTGGTGTGGTTCCACAAGATACTGTACTATTCAATGATACAATTTTTCATAACATTCACTATGGTCGGCTTTCAGCAACAAAAGAGGAGGTCTATGAAGCTGCTCGGCGAGCAGCAATTCATGACACTATCATGAATTTTCCTGAGAAGTATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGTGGTGGGGAGAAGCAACGTGTTGCCCTAGCTCGTGCATTCTTAAAAGCACCTGCAATTCTGTTGTGTGATGAGGCTACAAGTGCTCTAGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAATCACTAGCAAATAATCGAACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAAGTGATCGAGCAAGGACCCCATGAGGTGCTCTTATCGAATGCAGGAAGATATGCACAGCTTTGGGGACAACAAAATAACACAGTCGACGCAATCGATACTGCCATCAAACTAGGAGCATAA 2202 0.4233 MLAAVTCASRHLLQIDARPTIGSGSGNRVRSLLSASGITTTSSIRTTRCYGYGYGISLNHRQPKTCPSLLFAIKGFLSDSSPSSSSQQSSTVDGRALFSTSTKTDDGTQKQKTASTIAKSPPGEQVADMKILRTLASYLWMRDNLEFRFRVFAALGLLVGAKVLNVQVPFLFKIAVDWLTTATGNAGAFASNSTALALFATPVAVLVGYGIARTGASAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRAINFILSAMVFNVVPTILEISMVSGILAYKFGAPFALITSLSVAAYVIFTLTITQWRTKFRKVMNKADNDASTRAVDSLINYETVKYFNNEVYEAEKYDEYLKRYEDAALKTQHSLALLNFGQNIIFSTALSTAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLIDMKSMFQLLEERADIKDKDNAIPLRFNGGNIQFENVHFGYLTERKILDGVSLVVPAGKSVAIVGTSGSGKSTVLRLLFRFFDPQSGSIMIDGQDIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAARRAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSNAGRYAQLWGQQNNTVDAIDTAIKLGA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00067 733 CDD ABC_6TM_ATM1_ABCB7 154 457 - -
Gabi629g00067 733 FunFam ABC transporter B family member 25 475 729 - -
Gabi629g00067 733 MobiDBLite consensus disorder prediction 98 120 - -
Gabi629g00067 733 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 58 714 IPR039421 -
Gabi629g00067 733 Pfam ABC transporter transmembrane region 152 436 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi629g00067 733 CDD ABCC_ATM1_transporter 483 718 - -
Gabi629g00067 733 FunFam ATP-binding cassette sub-family B member 7 123 471 - -
Gabi629g00067 733 MobiDBLite consensus disorder prediction 98 121 - -
Gabi629g00067 733 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 152 449 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi629g00067 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 718 IPR027417 -
Gabi629g00067 733 Gene3D - 474 729 IPR027417 -
Gabi629g00067 733 Pfam ABC transporter 499 648 IPR003439 GO:0005524
Gabi629g00067 733 Gene3D ABC transporter type 1, transmembrane domain 138 473 IPR036640 GO:0005524|GO:0016020
Gabi629g00067 733 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 483 717 IPR003439 GO:0005524
Gabi629g00067 733 SMART AAA_5 508 694 IPR003593 GO:0016887
Gabi629g00067 733 SUPERFAMILY ABC transporter transmembrane region 145 462 IPR036640 GO:0005524|GO:0016020
Gabi629g00067 733 ProSitePatterns ABC transporters family signature. 620 634 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00067 Gabi-Chr629 565475 597209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00067 319 719 Calmodulin-binding Proteins AT2G36910 36.165 4.51e-65 233