Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00066 ATGCTTGCTGCTGTTACTTGTGCGTCTAGGCACCTTCTTCAAATCGATGCCAGACCCACCATTGGTAGTGGTAGTGGCAATCGAGTTCGCTCGCTTTTAAGTGCTTCTGGCATCACCACCACCTCCTCAATTCGCACTACAAGATGTTACGGTTACGGTTATGGAATCAGTTTGAATCACCGCCAACCCAAAACATGCCCAAGTTTACTTTTTGCTATAAAGGGGTTTCTCTCTGATTCATCACCTTCTTCTTCTTCGCAACATGGCAGAGGAACCAGACCTTACCTACCACAATCTAGTTCAACGGTAGATGGGCGAGCGTTGTTCTCAACATCAACTAAAACTGATGATGGAACCCAGAAACAAAAGACAGCTTCTACCATTGCTAAATCACCTCCTGGGGAACAAGTCGCTGATATGAAGATCCTTCGTACACTTGCCAGTTACTTGTGGATGAGAGATAACCTCGAATTTCGGTTTCGGGTTTTTGCTGCATTGGGTTTACTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTCAAGATTGCAGTTGATTGGTTGACGACTGCCACCGGCAATGCTGGTGCTTTTGCTTCTAATTCAACTGCGCTGGCTCTTTTTGCAACCCCGGTGGCTGTGTTGGTTGGATATGGGATTGCACGTACTGGAGCTTCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTAGCACTGCGAACGATTCGATTAGTATCCAGGAAGGTCTTCTCACACTTGCATGATCTTGACCTTCGGTATCATCTAAGTCGAGAAACTGGTGCGTTAAGTAGAATAATTGATCGTGGTAGCCGTGCAATAAATTTCATTCTCTCCGCTATGGTTTTCAATGTAGTACCCACCATATTGGAGATATCTATGGTATCAGGTATACTGGCCTACAAATTCGGAGCTCCTTTTGCGTTAATTACATCCCTATCAGTTGCTGCTTATGTTATTTTTACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAAAGTCATGAATAAGGCTGATAATGATGCTAGTACAAGGGCTGTTGATTCGCTTATTAACTATGAGACTGTCAAATATTTCAATAATGAAGTTTATGAAGCTGAAAAATATGATGAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACACAACACAGTCTTGCTTTGTTGAACTTTGGTCAAAATATTATATTTAGTACTGCTCTTTCAACAGCAATGGTGCTGTGTTCTCATGGTATCATGGATGGCACAATGACTGTTGGCGATTTGGTGATGGTGAATGGGCTTCTCTTCCAGCTATCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTCTAATTGACATGAAGTCCATGTTTCAGTTACTTGAGGAAAGAGCAGACATCAAGGATAAAGACAATGCAATACCTCTGAGATTTAATGGGGGTAACATCCAATTTGAGAATGTACATTTCGGTTACCTCACAGAAAGAAAGATACTAGATGGAGTATCACTTGTTGTGCCGGCTGGTAAAAGTGTGGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCGTACTTAGATTGCTATTCAGGTTTTTTGATCCTCAATCTGGAAGTATAATGATAGATGGTCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCTATTGGTGTGGTTCCACAAGATACTGTACTATTCAATGATACAATTTTTCATAACATTCACTATGGTCGGCTTTCAGCAACAAAAGAGGAGGTCTATGAAGCTGCTCGGCGAGCAGCAATTCATGACACTATCATGAATTTTCCTGAGAAGTATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGTGGTGGGGAGAAGCAACGTGTTGCCCTAGCTCGTGCATTCTTAAAAGCACCTGCAATTCTGTTGTGTGATGAGGCTACAAGTGCTCTAGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAATCACTAGCAAATAATCGAACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATCATTGTTTTGGAAAATGGAAAAGTGATCGAGCAAGGACCCCATGAGGTGCTCTTATCGAATGCAGGAAGATATGCACAGCTTTGGGGACAACAAAATAACACAGTCGACGCAATCGATACTGCCATCAAACTAGGAGCATAA 2235 0.4242 MLAAVTCASRHLLQIDARPTIGSGSGNRVRSLLSASGITTTSSIRTTRCYGYGYGISLNHRQPKTCPSLLFAIKGFLSDSSPSSSSQHGRGTRPYLPQSSSTVDGRALFSTSTKTDDGTQKQKTASTIAKSPPGEQVADMKILRTLASYLWMRDNLEFRFRVFAALGLLVGAKVLNVQVPFLFKIAVDWLTTATGNAGAFASNSTALALFATPVAVLVGYGIARTGASAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRAINFILSAMVFNVVPTILEISMVSGILAYKFGAPFALITSLSVAAYVIFTLTITQWRTKFRKVMNKADNDASTRAVDSLINYETVKYFNNEVYEAEKYDEYLKRYEDAALKTQHSLALLNFGQNIIFSTALSTAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLIDMKSMFQLLEERADIKDKDNAIPLRFNGGNIQFENVHFGYLTERKILDGVSLVVPAGKSVAIVGTSGSGKSTVLRLLFRFFDPQSGSIMIDGQDIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAARRAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSNAGRYAQLWGQQNNTVDAIDTAIKLGA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00066 744 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 163 460 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi629g00066 744 Pfam ABC transporter transmembrane region 163 447 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi629g00066 744 MobiDBLite consensus disorder prediction 81 132 - -
Gabi629g00066 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 729 IPR027417 -
Gabi629g00066 744 SUPERFAMILY ABC transporter transmembrane region 156 473 IPR036640 GO:0005524|GO:0016020
Gabi629g00066 744 MobiDBLite consensus disorder prediction 81 131 - -
Gabi629g00066 744 Gene3D ABC transporter type 1, transmembrane domain 149 484 IPR036640 GO:0005524|GO:0016020
Gabi629g00066 744 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 144 725 IPR039421 -
Gabi629g00066 744 CDD ABCC_ATM1_transporter 494 729 - -
Gabi629g00066 744 SMART AAA_5 519 705 IPR003593 GO:0016887
Gabi629g00066 744 CDD ABC_6TM_ATM1_ABCB7 165 468 - -
Gabi629g00066 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 494 728 IPR003439 GO:0005524
Gabi629g00066 744 Pfam ABC transporter 510 659 IPR003439 GO:0005524
Gabi629g00066 744 Gene3D - 485 740 IPR027417 -
Gabi629g00066 744 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524|GO:0016887
Gabi629g00066 744 FunFam ATP-binding cassette sub-family B member 7 134 482 - -
Gabi629g00066 744 FunFam ABC transporter B family member 25 486 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00066 Gabi-Chr629 565475 597209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00066 330 730 Calmodulin-binding Proteins AT2G36910 36.165 5.58e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00066 K05662 - gmx:100779975 1209.51