Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00033 ATGGCACCTGTTTCACTGCCACCCGGTTTCAGGTTCCACCCTACCGATGAAGAACTTGTTGCTTATTACCTCAAAAGGAAGATCAATGGCCGAAAGATTGAGTTGGAGATCATACCCGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAGTCCTTGTTACCTGGAAAAGATATGGAATGGTATTTCTTTAGCCCTCGTGATAGGAAGTACCCAAATGGATCAAGAACGAACCGTGCAACCAAATCTGGATATTGGAAAGCCACAGGTAAGGATCGGAAAGTGAATTCACAGGCTCGGGCAGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGTAGAGCACCCCATGGCTCTCGTACAAATTGGGTTATGCATGAATATCGTCTTGATGAGAGAGAATGCGAAACCCCTACAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTTCAAGAAGAGTGCAGTGATTACACCAAAAGTTGGGGAGCACTATGTTAATGTCACTAGCCATGCCAACCAGATTACAAGCGATCAATCATCAAGCATTGAGCTACACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCAAATTATTTGATGCCAATGGATATAACTTGCTCACCCCACAACATGAGATATGAGACTTCTCTCAATACCAATGGTGGGATAAGTGATCATGGGAATTGGTCACACTTCTCATCAGAAGACCCATTATTTAGTCTTCCAACAACTTCTTTACTTCCTAACTATGGAGCCATAACATACCCTACATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTGCTGTGCCTCCTTTGGAGGTGGAGGATTTCCCTCAAGTTGGAATCTCTGAGCTGAAGATGACACAAGCCTACGGTGCCACACACGGAAGCAGAAATGAAACGGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCTCAGGAATTGATAAATCAGTCCAGCTACTCACAGGCATGGGGTGGGAATGAAAATTGTGCTCCTCGTGAGGATGATTTCACTTTCATGGTTGGCACTAATTACAACCATTTAAGTGATATGAGCTCCATGAGATATGTTGACAAAACATGGGAAGATTCAAACACAATGTCCATAGATATTGGAGATTTGGATGAAGAATTCAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGCTTGGAATGTCAAGAAAAGATTTAGAGAAGATGGAAGAACAAAAGATTGTTCCAATCAAGGATATTTCAAGCTTCCAAACAAACAAGGAAGAAAATGAGGTGCAAGCAGAATCTGATCATCACAATAGCAACAAGGAGCACAATGACACTTACATCAATGATTTCTCATTAGGCTTCGTCAATGATGATGACCCTAACGAGAACTTCATAGATGATAGTAATAACATTAATGATTACTCAAGTTCTCCAAGCTTTGAGGTCATTGAGGAAATTAAGGTCAGTCATGGGATGTTAGTTTCGACTCGACAAGTAGCCGAGACATTCTTTCACCAAATAGTTCCTTCACAAACCGTCCAAGTTCATCTCAATCCAATGATGGCAAACAATCATTATATAGAGAATGCAGAGGCACTGATGAAGATAGTGGAGAACCAAGGTTCTTTCTTTAACAAGTTTAAGGCCTATGTGATGAGAAAGCTAATAAAGCCATCAAAGGCAATAGCCAATGCGATTGTACTCGTATTTGCACTTCTGTTGATACATTGTGTTCATTCGAAAGAAGAAGTGGAAATTTGGAAACCAGACATAGTGGATGTGAAGAGAATGAGACAATCATCTGAGATAATCAAATGGAATGAGTTAAAAAAGGTTTGGTTTAATTGTGTCAAAAGTGAGAAAGGATTCAGTGCAGTCTTGAAGAAAATAGGCATTTTCCTCACCATATCTTTGGCTCTTTGTACAATGTGGGCTAACCACAATATAGGAAACCCTTGA 1980 0.4121 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDMEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETPTGLQDAYALCRVFKKSAVITPKVGEHYVNVTSHANQITSDQSSSIELHSEGRGEDLDSSNYLMPMDITCSPHNMRYETSLNTNGGISDHGNWSHFSSEDPLFSLPTTSLLPNYGAITYPTSKVDIALECARMQHRFAVPPLEVEDFPQVGISELKMTQAYGATHGSRNETDILQEILSVAHASQELINQSSYSQAWGGNENCAPREDDFTFMVGTNYNHLSDMSSMRYVDKTWEDSNTMSIDIGDLDEEFKAERMVENLRWLGMSRKDLEKMEEQKIVPIKDISSFQTNKEENEVQAESDHHNSNKEHNDTYINDFSLGFVNDDDPNENFIDDSNNINDYSSSPSFEVIEEIKVSHGMLVSTRQVAETFFHQIVPSQTVQVHLNPMMANNHYIENAEALMKIVENQGSFFNKFKAYVMRKLIKPSKAIANAIVLVFALLLIHCVHSKEEVEIWKPDIVDVKRMRQSSEIIKWNELKKVWFNCVKSEKGFSAVLKKIGIFLTISLALCTMWANHNIGNP 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00033 659 MobiDBLite consensus disorder prediction 426 449 - -
Gabi629g00033 659 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Gabi629g00033 659 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Gabi629g00033 659 FunFam Nac domain-containing protein 86 15 159 - -
Gabi629g00033 659 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Gabi629g00033 659 MobiDBLite consensus disorder prediction 434 449 - -
Gabi629g00033 659 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Gabi629g00033 659 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00033 Gabi-Chr629 283012 287009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00033 1 650 NAC Transcription Factor Family AT1G65910 44.702 1.49e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi629g00033 NAM 2.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00033 - - gmx:100809019 1001.5