Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00015 ATGTCGCTACTTTGCTTCGTCGTTGTCCCCTTAACACTCTTCTTCTTCTTCTTCAATGCCATATCCGCAGCCGCCGCCACCGAGTTTGACTTTGGAACCTTAACATTGAGCAGTCTCAAACTTCTCGGCGATGCCCACTTGAACAACGGCACCGTTTGTCTCACTCGCGACCTCGCCGTCCCCAACTCTGGCGCCGGCAGGGCCCTCTACTCTCGACCAGTAAAATTCCGGCAACCCGGAACCCACCTTCCGACCAGCTTCACCACCTTCTTCTCCTTCTCCATCACCAACCTCAACCCCTCCTCCATCGGCGGCGGACTCGCCTTTGTCATCTCCCCGGACGACGAGACAATCGGCGACGCCGGCGGGTTCCTCGGCCTGCTCGATGCAACGGAGGGTGACGGCGGCGGAGGCTTCATCGCGGTGGAGTTCGACACCCTTATGGACGTGGAGTTCAAGGACATTAACGGGAACCATGTTGGGGTGGACCTGAATAGCATGGTTTCGAGCCAAGTTGGTGACTTGGATTCCATTGGGATCGATCTCAAGAGTGGCGATTTGGTGAATGCGTGGATCGAGTTCAACGGATCCAACAAAGGGTTGAACGTGTGGGTTTCGTACTCCAATCTCAAACCCAAAGACCCAATTTTGTCGATGAATCTGGATGTGGATCAGTACTTGAGTGACTTCATGTATGTGGGGTTCTCTGGTTCAACGCAGGGTAGCACAGAGACTCACAGTGTCGAGTGGTGGAGTTTTAGCTCATCTTTTGATTCTCGTCCGGCGGGTTCGGAGGCGGCGGCGCCGCCCCCTCCGGCGGTTAGTTTGATGAACCCAACTGCGAATTCAGTTAAGTCGCCGCCACCTTCTTTGGCTCCTAGTGCTTCATCGAATGAGGAACAAAAGGAGAGACAATCATCTTGTCACAATGGGTTGTGCAAGCAAGGTTTGGGAGCAGTTGCTGGGGTTGTGTCTGCTGGGGCATTTGTTCTGGCTCTGTTTGCAGGTGCATTGATTTGGTTTTACTCTAAAAAGGTGAAGCACGTGAACGAGTCTGCTTCACTTGGATCAGAAGTCATCAAGGTTCCAAAGCAGTTTAGCTACAAGGAGCTCAAATCGGCTACAAAGTGCTTCAATGCAAATAGGATAATTGGTCACGGTGCGTTTGGGACTGTGTATAAGGGTATTTTTCCTGAGAATGGGGACATTGTTGCGGTGAAGAGATGTAGCCATAGTAGTCAGGGTAAGAATGAGTTTTTATCCGAGTTATCCATAATTGGGAGCCTTAGACATCGAAATCTTGTTCGTCTTCAAGGTTGGTGTCAGGAGAAAGGCGAGATTTTATTGGTGTATGACTTAATGCCCAATGGGAGTTTAGATAAGGCTTTGTTTGAGGCCAGAACACCTCTTCCTTGGACTCACAGGCGCAAGATTTTGTTAGGTGTGGCCTCTGCGTTGGCCTACTTGCATCAGGAGTGTGAAAATCAGGTAATTCACAGAGACATTAAGACTAGTAACATAATGTTAGATGAAGGGTTCAATGCCCGGTTGGGAGATTTTGGTTTAGCAAGGCAAACCGAGCATGACAAGTCGCCGGATGCCACGGTGGCTGCGGGAACAATGGGGTACCTGGCACCTGAGTATCTTCTTACAGGTAAGGCTACAGAGAAAACTGATGTGTTCAGTTATGGTGCGGTGGTTCTTGAGGTTGCCAGTGGGAGAAGGCCTATAGAGAAAGATGGTAATGGCGTTGGTATTAGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGGGAAGGCAGGTTGCTAATGGCAGCTGATCCAAGGCTTGAGGGTGAGTTTGAGGAGGGAGAGATGAGGAGGGTACTCTTGGTTGGGCTAGCTTGCTCCCACCCTGATCCTTTGGCTAGACCCACTATGAGGGGTGTGGTTCAGATGCTGGTGGGTGAGACTGAAGTGCCTATTGTCCCAAGAACCAAGCCATCTACGGGTTTAAGTACTTCCCACTCCCACCTCTTACTGAGCTTGCAAGATAGTGTATCTGACTGGGATGGTATAATCACCATCTCTCCTTCCACATCAGAGAACAGCTTCAATGGTGGAGAAATAGTCTGA 2118 0.5042 MSLLCFVVVPLTLFFFFFNAISAAAATEFDFGTLTLSSLKLLGDAHLNNGTVCLTRDLAVPNSGAGRALYSRPVKFRQPGTHLPTSFTTFFSFSITNLNPSSIGGGLAFVISPDDETIGDAGGFLGLLDATEGDGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSMVSSQVGDLDSIGIDLKSGDLVNAWIEFNGSNKGLNVWVSYSNLKPKDPILSMNLDVDQYLSDFMYVGFSGSTQGSTETHSVEWWSFSSSFDSRPAGSEAAAPPPPAVSLMNPTANSVKSPPPSLAPSASSNEEQKERQSSCHNGLCKQGLGAVAGVVSAGAFVLALFAGALIWFYSKKVKHVNESASLGSEVIKVPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGIFPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCQEKGEILLVYDLMPNGSLDKALFEARTPLPWTHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDGNGVGISSNLVEWVWSLHREGRLLMAADPRLEGEFEEGEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGETEVPIVPRTKPSTGLSTSHSHLLLSLQDSVSDWDGIITISPSTSENSFNGGEIV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00015 705 SMART serkin_6 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00015 705 ProSitePatterns Legume lectins beta-chain signature. 140 146 IPR019825 -
Gabi629g00015 705 PANTHER - 50 655 - -
Gabi629g00015 705 MobiDBLite consensus disorder prediction 261 307 - -
Gabi629g00015 705 MobiDBLite consensus disorder prediction 277 301 - -
Gabi629g00015 705 Gene3D Transferase(Phosphotransferase) domain 1 454 655 - -
Gabi629g00015 705 ProSitePatterns Protein kinases ATP-binding region signature. 384 407 IPR017441 GO:0005524
Gabi629g00015 705 SUPERFAMILY Protein kinase-like (PK-like) 360 673 IPR011009 -
Gabi629g00015 705 Gene3D - 24 268 - -
Gabi629g00015 705 Pfam Legume lectin domain 27 262 IPR001220 GO:0030246
Gabi629g00015 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Gabi629g00015 705 CDD STKc_IRAK 384 648 - -
Gabi629g00015 705 FunFam L-type lectin-domain containing receptor kinase VIII.1 25 267 - -
Gabi629g00015 705 CDD lectin_legume_LecRK_Arcelin_ConA 43 248 IPR001220 GO:0030246
Gabi629g00015 705 ProSiteProfiles Protein kinase domain profile. 378 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00015 705 FunFam L-type lectin-domain containing receptor kinase VIII.1 454 666 - -
Gabi629g00015 705 FunFam L-type lectin-domain containing receptor kinase VIII.1 342 453 - -
Gabi629g00015 705 Pfam Protein kinase domain 379 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi629g00015 705 Gene3D Phosphorylase Kinase; domain 1 341 453 - -
Gabi629g00015 705 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 258 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00015 Gabi-Chr629 153792 156016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00015 11 687 Receptor kinase-like Gene Family AT3G53380 69.397 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gabi629g00015 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00015 - - gmx:100793157 1093.57