Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00004 ATGAAACCAAAATTTGATCTTGAATTGGAGGCCTATGCAGAATATGAATCTGAAGTTAGCAGCCAGGTTGCTTCCAATGTATCAATTCAAGAAACTTCTGCAGGTCCTTGTAGTAACAGCCTCACTAACTCTTCCAACCTCACAAACCCAATAGGGATTCATCCAAATTTAGATGCTATTTCACTTGACTTAACTCTCAACTTCAAGAATAATGAGTTTGGGACAAGAGATTCAATAGGATTCTCATTCTCAAGCACTAGTGAGAGCAGCAATGAACCTGCCTCTCAAACTACAGCAGCAACCATTCCTCGAGTTTTCCCTTGCAATTACTGTCAACGCAAATTTTTAAGCTCTCAGGCTCTTGGTGGACACCAGAATGCACACAAGAGGGAAAGAACATTAGCAAAAAGGGCAATGCGAATGGGTTTTTTTACTGAGAGGTATGCTAGTCTTGCATCTCTTCCTCTGCATGGTTCTTACAGGACCTTAGGGATAAAGGCACACTCTTCAATGCACCATGTTTTCCCACCAACAATGAGGCCTCCCGAGATAAAAAGCAATGCAAGATTTGAGCAAGAATATCCTGGCCTTCCAATATTCTTGGAGGATGATGAGTCAGATTTGTTGTGGCCTGGTAGTTTCCGTCAGGTTGCAGAGGCAGGTGATAGTCATCAGAATTTCATACTAACTGCAAGTACAGACTTGAGTTTTAGTGAGGTAAATCCACCAGTAGACATAAAGAACTCAACACCAGATTTGACATTGAAACTCTGA 774 0.416 MKPKFDLELEAYAEYESEVSSQVASNVSIQETSAGPCSNSLTNSSNLTNPIGIHPNLDAISLDLTLNFKNNEFGTRDSIGFSFSSTSESSNEPASQTTAATIPRVFPCNYCQRKFLSSQALGGHQNAHKRERTLAKRAMRMGFFTERYASLASLPLHGSYRTLGIKAHSSMHHVFPPTMRPPEIKSNARFEQEYPGLPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTASTDLSFSEVNPPVDIKNSTPDLTLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00004 257 FunFam Zinc finger protein 2 83 152 - -
Gabi629g00004 257 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 60 184 IPR044246 GO:0009788
Gabi629g00004 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Gabi629g00004 257 SUPERFAMILY beta-beta-alpha zinc fingers 104 133 IPR036236 -
Gabi629g00004 257 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Gabi629g00004 257 Gene3D Classic Zinc Finger 84 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00004 Gabi-Chr629 37985 40724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi629g00004 1 257 C2H2 Transcription Factor Family AT1G66140 44.561 1.02e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00004 - - gmx:100794851 427.557