Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi629g00001 ATGTATTGGTGTTTCTCATCAAAATTCACTCTCTTTTTCTCATGGGAATGTGTTTGCAAGGAAAAGATGAGTGTTTCTTCCTCCAGAGAAGGTAACAAGGATGAGCAAGAGGCCCAATCTGAAGCCTGCAAGCCAAGGTGGCTTGAGGATTTTCTGGAAAATACTTTCTTTGACTCATGTACAGCTCATCCATGTCGTAGGAATGAGCTAAATAAATACTGTATAAACTGCAATATGTCACTTTGCCAATATTGTGTATCATCAGGTCCTCATCGCCATCACAAGATACTTAAAATCTATAGACATGTTTACAAAGATGTCGTCTCCCTTGCTGCTATGGAAAAATATGTTGACTGCTCACAAATCCAGCCCTACAAATGCAACAAGCGACTAGTTATTTCTCTGAATCCTCTCCCGCACTGTGGTTCAGCATTAAATAATGAGGCAACATGCAACATCTGCAGTAGAAAGTTGACTGAACCCGATTTATATCGCTACTGCTCTATTTCTTGCAAGGTCAAAGCTTTTTTAAGAAAGCCTGATGATTCAGTTCCTCCCTTTATTTCCATCCAGAGTCCTCCTCAGGAAAAACAGGAGGAAACTTCTCCTCCCTTTATTTCCATCAAGAGTCCTCCTCAGGAAACACAGGATGAAACTTCTGCCTTTATTCCCATCAAGTTTCCTCCTGAGGAAACACAGGAGGAAACTTCTCCTTTTATTTCCATCCAGAGCCCTCCTCAGGAAACACAGGAGGTAACTTCTGAACCCCCAAAGCGAAAAAGGAAAAGAAAGGGAACACCCCGCAGAGCTCCCTTCTTCTAA 822 0.4197 MYWCFSSKFTLFFSWECVCKEKMSVSSSREGNKDEQEAQSEACKPRWLEDFLENTFFDSCTAHPCRRNELNKYCINCNMSLCQYCVSSGPHRHHKILKIYRHVYKDVVSLAAMEKYVDCSQIQPYKCNKRLVISLNPLPHCGSALNNEATCNICSRKLTEPDLYRYCSISCKVKAFLRKPDDSVPPFISIQSPPQEKQEETSPPFISIKSPPQETQDETSAFIPIKFPPEETQEETSPFISIQSPPQETQEVTSEPPKRKRKRKGTPRRAPFF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi629g00001 273 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 38 272 - -
Gabi629g00001 273 ProSiteProfiles Zinc finger B-box type profile. 60 99 IPR000315 GO:0008270
Gabi629g00001 273 MobiDBLite consensus disorder prediction 188 220 - -
Gabi629g00001 273 MobiDBLite consensus disorder prediction 185 273 - -
Gabi629g00001 273 Pfam PLATZ transcription factor 101 173 IPR006734 -
Gabi629g00001 273 SUPERFAMILY B-box zinc-binding domain 59 101 - -
Gabi629g00001 273 Gene3D Classic Zinc Finger 53 118 - -
Gabi629g00001 273 MobiDBLite consensus disorder prediction 234 252 - -
Gabi629g00001 273 CDD Bbox2 60 99 - -
Gabi629g00001 273 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi629g00001 Gabi-Chr629 6804 11817 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi629g00001 PLATZ 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi629g00001 - - qsa:O6P43_014262 273.863