Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi61g00007 ATGGAAGCGAATCCTACCCGTGATGGCCATTTCAGCGAAGAAGAGGACACCCACAGTGTCGATGTCTCTCCCTCCGAGACGGCGACGCCAATGGTGGTGGAGCCGCCGGAGCAACCGCCGATGGCTGCACTGAAAGAAGAGGTCACGGACACGGAGCAAAGCCTGGAAGAGCCTCTTCCGGTGAGCGTTATTCCGATGCCGTTGACTACGTCAACGCTGGCGGTGGCGAGGAAACCGTCGAAGGACCGCCACACGAAGGTGGAGGGCCGCGGCCGGAGAATCCGAATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACCCGGGAGCTGGGCCACAAGTCCGACGGGGAAACAATCCGGTGGTTGCTTGAGCAAGCTGAACCGGCGATTATAGAAGCCACCGGTACCGGAACGATCCCGGCCATCGCTGTGTCCGTCGGCGGCACCCTAAAGATTCCAACATCATCGCCAGCGAGGCCAGATGGAGAAGATACCCCGAGGAAGCGAAGGAGAAGAGCATCGAACAGTGAGTTCATTGATGTGAACGATCAAGTTTCAGTGTCTTCAGGGCTTGCACCAATTGCACAAACCGCATACGGTGGTGGTGGTGGTAATGGTGGCGGCGGCGCACTAGTCCCTTTGTGGCCTGTGGGTGGCGGCGGTGGGTCTAATGGTACAGGGCCTTTCTTAATGTTCCCGAATGGTGGAAACCAGCCTCAGTACTGGGCCATTCCTGCAACTGCAGCACCGTTTTTTAATGTACAAGCAAGACCCATTTCGGATTTTGTTTCTGCTATGCAGATGCAACATGGTGACCAATTAGGTCAGGTGATGGTGAAGCCTTCTTCCGGGTCCACTTCAAATGGTGCCTCTGCCTCTGCCTCTGCATTGGGTTCTGCTAACTCTTCATCCACTTTGGCTCCTAGTTTGAGCTCAGGAACTACTACTAGTACTACAGTTACCTCATCCTCCAGTGCTACCACCACTCAGACGCTCAGGGATTTCTCTTTGGAAATCTATGACAAGAAAGAGCTTCAATTCTTGGGTCGCTCTGCTTCAAATTCAGAACCACTACCTCCCACTTCAAAGGCTTGA 1098 0.551 MEANPTRDGHFSEEEDTHSVDVSPSETATPMVVEPPEQPPMAALKEEVTDTEQSLEEPLPVSVIPMPLTTSTLAVARKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGEDTPRKRRRRASNSEFIDVNDQVSVSSGLAPIAQTAYGGGGGNGGGGALVPLWPVGGGGGSNGTGPFLMFPNGGNQPQYWAIPATAAPFFNVQARPISDFVSAMQMQHGDQLGQVMVKPSSGSTSNGASASASALGSANSSSTLAPSLSSGTTTSTTVTSSSSATTTQTLRDFSLEIYDKKELQFLGRSASNSEPLPPTSKA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi61g00007 365 MobiDBLite consensus disorder prediction 1 21 - -
Gabi61g00007 365 MobiDBLite consensus disorder prediction 1 58 - -
Gabi61g00007 365 MobiDBLite consensus disorder prediction 151 179 - -
Gabi61g00007 365 MobiDBLite consensus disorder prediction 162 178 - -
Gabi61g00007 365 MobiDBLite consensus disorder prediction 278 329 - -
Gabi61g00007 365 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
Gabi61g00007 365 Pfam TCP family transcription factor 80 151 IPR017887 -
Gabi61g00007 365 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 343 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi61g00007 Gabi-Chr61 69010 70844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi61g00007 35 349 TCP Transcription Factor Family AT5G51910 48.607 1.89e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi61g00007 TCP 5.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi61g00007 - - gmx:100819475 370.163