Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi61g00006 ATGGAAGCGAATCCTACCCGTGATGGCCATTTCAGCGAAGAAGAGGACACCCACAGTGTCGATGTCTCTCCCTCCGAGACGGCGACGCCAATGGTGGTGGAGCCGCCGGAGCAACCGCCGATGGCTGCACTGAAAGAAGAGGTCACGGACACGGAGCAAAGCCTGGAAGAGCCTCTTCCGGTGAGCGTTATTCCGATGCCGTTGACTACGTCAACGCTGGCGGTGGCGAGGAAACCGTCGAAGGACCGCCACACGAAGGTGGAGGGCCGCGGCCGGAGAATCCGAATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACCCGGGAGCTGGGCCACAAGTCCGACGGGGAAACAATCCGGTGGTTGCTTGAGCAAGCTGAACCGGCGATTATAGAAGCCACCGGTACCGGAACGATCCCGGCCATCGCTGTGTCCGTCGGCGGCACCCTAAAGATTCCAACATCATCGCCAGCGAGGCCAGATGGAGAAGATACCCCGAGGAAGCGAAGGAGAAGAGCATCGAACAGTGAGTTCATTGATGTGAACGATCAAGTTTCAGTGTCTTCAGGGCTTGCACCAATTGCACAAACCGCATACGGTGGTGGTGGTGGTAATGGTGGCGGCGGCGCACTAGTCCCTTTGTGGCCTGTGGGTGGCGGCGGTGGGTCTAATGGTACAGGGCCTTTCTTAATGTTCCCGAATGGTGGAAACCAGCCTCAGTACTGGGCCATTCCTGCAACTGCAGCACCGTTTTTTAATGTACAAGCAAGACCCATTTCGGATTTTGTTTCTGCTATGCAGATGCAACATGTTACCTCATCCTCCAGTGCTACCACCACTCAGACGCTCAGGGATTTCTCTTTGGAAATCTATGACAAGAAAGAGCTTCAATTCTTGGGTCGCTCTGCTTCAAATTCAGAACCACTACCTCCCACTTCAAAGGCTTGA 951 0.5594 MEANPTRDGHFSEEEDTHSVDVSPSETATPMVVEPPEQPPMAALKEEVTDTEQSLEEPLPVSVIPMPLTTSTLAVARKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPDGEDTPRKRRRRASNSEFIDVNDQVSVSSGLAPIAQTAYGGGGGNGGGGALVPLWPVGGGGGSNGTGPFLMFPNGGNQPQYWAIPATAAPFFNVQARPISDFVSAMQMQHVTSSSSATTTQTLRDFSLEIYDKKELQFLGRSASNSEPLPPTSKA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi61g00006 316 MobiDBLite consensus disorder prediction 1 21 - -
Gabi61g00006 316 MobiDBLite consensus disorder prediction 1 58 - -
Gabi61g00006 316 MobiDBLite consensus disorder prediction 162 178 - -
Gabi61g00006 316 Pfam TCP family transcription factor 80 151 IPR017887 -
Gabi61g00006 316 MobiDBLite consensus disorder prediction 151 180 - -
Gabi61g00006 316 ProSiteProfiles TCP domain profile. 80 134 IPR017887 -
Gabi61g00006 316 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 57 185 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi61g00006 Gabi-Chr61 69010 70862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi61g00006 35 300 TCP Transcription Factor Family AT5G51910 56.364 1.81e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi61g00006 TCP 3.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi61g00006 - - qsa:O6P43_005529 363.999