Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi618g00012 ATGACTGTAGGAGAAGCATTTTTGTCAGCTTTCATTCAGGTTTTGTTTGACAGGTTGGCCTCAAAGAATGTTGTAGATATTATTCTTGCACGAGACAATGACAAAGTCCTGAAGAAATTTCAGAAGACTTTGCTGCTCATTAAAGCAGTACTAAATGATGCAGAGGACAAGCAGGTTAAAAATGAGGCTGTGAGAATGTGGTTGGTCGAGCTTAAAGATGTGGTTTATGATGCAGAAGATGTTCTTGACGACTTTGCTACCGGAGTGCTGAGGAGGAGGTTGGAATCTGAATCTCAAACCACCTTTACTCAAATATGGAACCGTGTCCCAACTTCTCTCAATCCAAGTAATTTGATGTTTGATGTTGGGATAGAATCTAAGATAAAGGTGATCACGGAGAGGCTGAATAATCTTGCAAATGAAAGGCATGAACTTGGTTTAAGTGAGATTGCTGCTGGGTGTCCATTCAAATTCAAAGAAACATCTTCCATGGTGAATGAGTCCTACATCTGTGGGAGAGATATGGACAAAGAGAAGATTATCCGAGTGCTGATGGAGAATATGTCAAGCCATGGCGATGAAGAAATTATCTCGGTCATTCCCATTGTGGGAATGCCAGGTGTTGGGAAAACAACATTGGCTCAGGTTGTGTTTAATGATGACAAGGTGAATCTGCAGTTTGAACTCAAGGCATGGGTGTCTGTACCTGATGATTTTGATGTCAAGATCATAACAGGAAAGATTCTTGAGTCAGCCACTTCCAGAACCTGTGATCTCAATAGCTTGCAACAGCTTCAGGTTAACCTCAAAGCAGCCTTGAGAGGCAAGAAGTTTTTGGTTGTTCTGGATGATGTGTGGAATAAAAATTACAATGAATGGATTAAGCTGGTAGCTCCATTCAACGGAGGTGCTCCGGGAAGCGCAGTGATAGTAACAACAAGGAATGCACAAGTTGCTAAAATGGTGGGAACTGTTGAATCTCACTATGTCAACAAGTTATCTGAGAAGGACTGTTGGTCAGTATTTGTGCAGCATGCTTTTAGGAGTAAAACTATTGATGCAAATCAAGCCCTTGCAGAAATTGGTGAGAAGATTGCTCAGAAATGCAAAGGCTTACCGTTGGCGGCAACAACAATTGGAGGCATTTTATCCTCAAAGCATGATGAAGAGTGGGAGCATGTAATGAACTTTGAAATATGGGATCTTGCAGAGGAGGAAAGTGACATGCTCCAAGCATTAAGATTGAGTTATGATCAGCTTCCTTCACACCTAAAGCGATGTTTTGCATACTGCTCCATACTACCAAAAGGCTTTGAATTCGGGGAGAAAGAGCTAGTGTTGCTGTGGATGGCAGAAGGATTTTTGGAACAACAAGCACAGAAGCAAATGGAAGATGTGGGCCATGAGTACTTTCGAGATCTACTCTCTGCTTCACTTTTTCAAAGGTCAAGTAGCAACAGATCATTGTATGTAATGCATGACCTTATCAATGATCTAGCTCAGTGGGTTGCTGGAGAATCCTGTTTCAAATTGGACACTAATTTTCACTCACATGGACAAATAAAAAAGAGAATTTCCAAACGGGCTCGGCATGCATCTTACGTTGGTGGTGAATATGATGGTATTCAAATGTTTCATGCCTTCAAAGAAGCCAAGTCTTTAAGAACATTCCTCCCTCTAAAGCGTCAAAGGCTAGAAAAATGGTCCTACATAACTAATCAGGTTCCTTTTAAATTATTACCTGAGTTAAGATGCTTAAGAGCTTTGTCATTGAGAGGATATTTCATCAGTAAGCTTCCTGATTCAATTAGCAATTTGAAGCATCTACGCTACCTGAATCTTTCTTGCACTAGCATCAGAAAGTTGCCAGAATCAGTCTGCAGTCTGTGCAATCTACAAACATTATTACTGAAACACTGTTTCAATCTTGAGGAGCTTCCATCAAACATGGGTGATTTGATCAACCTACGCCATCTAGATATCACGGGAGCACATTCTTTAACAGGTATGCCCCATGGTATTGGTAAATTGACACATCTTCAAACATTGTCAAACTTTGTTTTAGGCAAAAGTGGGATCAGAGAATTGATGATGTTGTCAAATCTCCAAGGGATACTTTCTGTGTCCAGGTTAGAGCATGTGACCGACACTCGAGAAGCAGTTGAAGCTATGTTAAATAAGAAGGTAGGCATTGATGTGCTGAAATTGAAATGGAGCTGTTGTTTGAATGATGAGTCTCATATTCGAAGAGAAAATGATGTGCTTCAAATGCTACAACCTCACAAAACTCTTACAAAGCTTACTGTGAGGTGCTATGGTGGTATCAGCTTCCCAAAATGGATAGGAGATCCATCCTTCAAGAGTCTAGTGTTCTTAAAGTTGAGAGATTGTGCAAATTGTACAACTTTGCCAATACTTGGAAATCTCCATGCTCTCAGAGATCTTTACATCATTGGAATGAAAGAAGTATGCTGCATTGATGGTGGGTTCTATGGTGATGGTTGCTTAAGACCTTTCCCTTCCTTGGAGAGACTACATTTCATGGATATGGAAAATTGGGAAAATTGGTTCCCCTCTGGCAATAATGAGCAGAGTGACATATTTTCTTCTTTGCAGCAGCTTTTCATTGTGAAGTGTCCCAAACTTTTGGGAAAACTACCTGAAAATCTTCCTTCTCTCAAATATCTATTAGTTAAAGAATGTGAACGATTGATGGTTACCCTTTCAAACCTTCCTCTGCTCTGCAAACTGGAAGTTGAAGGATGCAAAGGCTTAGTTCTTAATTGCACAACTGAATTCATGTCATTGAACTCCATGGCTATTTCAAGCATCTCTGAGTTAACATCATTAAGGGAGGGGTTGGTACAAGGGTTCAAAAGAGTTGAAAAACTCAAAATTGTCAATTGTGCTCTTGATGAGATAGTTCTTGCTGATTGGTGGGGAAATGAAGTTTGGTCAGAGAAGCATCCACATGGTTTGTCATCCATGCTCAGATCAATTGAGATTAGAAATTTCAGTGTCATGAGATTTATCCCTAAAGCACTAATGTTCAACAGCCATTTTCTTGAACGCTTATGCATATGTAATTGTGATTCCCTAGTCTTTGTCACAACTGATCAACTGCCTCCCACTCTGAAATCATTGGAGATATCAAACTGTAAGAACTTGCAGTGTTTACTAGACAATGGAGAATGCTCTTCTTCAACAATAACTATGCAAGAGGACAATAACCAGAATAGTGGCACAAGCATTTCTCATCTGGAGTATATATACATTGGCTGGTGTCCATCTCTCACTTGCATATCAAGAAGTGGTGAGTTACCTGAGGCTGTCAAACTTTTGTTCATTTGGAATTGTTCAGAGCTAACATGCTTGTCAATGAAAGGCCAGTTACCTAAAAATCTTGAAAAACTGGAGATTCAATGCTGTCCAATGCTAGATTCAATCGCAAGCACTATGCATGGAAACACTTCCTTGGAATCTGTTCAGATATGGAACTGTGAAAACCTTAAATCCCTCCCTGATGGCTTGCATTGCCTTGTGAATCTAAAACAGATCAAAATTATTGGTTGTCCAAGTTTGGTCTCCTTCCCAGAAGAAGGTTTTCCCACCTCTTGTCTGACAGAACTTTGCATCATGAGCTGTGAGAAACTAGAGGCCCTACCAAACTGCATGCATGATCTCAAATCCCTCAAAGAACTGGAGATAGGATACTGTCCTAGCATTCAATATGTTCCTGAAGAAGGCTTTCCAGCCAACTTAACATCCCTTTGGATCAATGACCATAATGCCTGGGAAGCAATGTTCAACTGGGGTTTATACAAGTTCACTTTTCTTAGGGACCTCACCATCATAGGTGTAAGTATGCATATGCCACTTGAGGAACTGGGGACAATGTTACCATCCTCTTTGACCAGCCTCACTATTCAAGGATTTCCACAGTTAAAGTACATGTCTTCAAAGGGCTTTCATAATCTTACTTCCTTATCTAGCCTTGCCCTTAGAGATCTTGTAAATCTAACATCCCTACCATCCTTGGGGTTTGATTACCTTACCTCTCTTGAAGAACTTTCTATTTATAACTGTCCCAAGATTTTCTGTTTACCCAAAAAGGGCCTTCCTTCCTCACTTTTGGAACTCTATATTCAAGACTGTCCTCTGCTTAAACAACAGTGCATGAAAGATAAAGGGAATGACTGGTCGAAGATAGTTGACATCCCTTATGTTGAGATTGATGGCAAATTTATCTATGACTCGGATGACGAGTATTGA 4272 0.4026 MTVGEAFLSAFIQVLFDRLASKNVVDIILARDNDKVLKKFQKTLLLIKAVLNDAEDKQVKNEAVRMWLVELKDVVYDAEDVLDDFATGVLRRRLESESQTTFTQIWNRVPTSLNPSNLMFDVGIESKIKVITERLNNLANERHELGLSEIAAGCPFKFKETSSMVNESYICGRDMDKEKIIRVLMENMSSHGDEEIISVIPIVGMPGVGKTTLAQVVFNDDKVNLQFELKAWVSVPDDFDVKIITGKILESATSRTCDLNSLQQLQVNLKAALRGKKFLVVLDDVWNKNYNEWIKLVAPFNGGAPGSAVIVTTRNAQVAKMVGTVESHYVNKLSEKDCWSVFVQHAFRSKTIDANQALAEIGEKIAQKCKGLPLAATTIGGILSSKHDEEWEHVMNFEIWDLAEEESDMLQALRLSYDQLPSHLKRCFAYCSILPKGFEFGEKELVLLWMAEGFLEQQAQKQMEDVGHEYFRDLLSASLFQRSSSNRSLYVMHDLINDLAQWVAGESCFKLDTNFHSHGQIKKRISKRARHASYVGGEYDGIQMFHAFKEAKSLRTFLPLKRQRLEKWSYITNQVPFKLLPELRCLRALSLRGYFISKLPDSISNLKHLRYLNLSCTSIRKLPESVCSLCNLQTLLLKHCFNLEELPSNMGDLINLRHLDITGAHSLTGMPHGIGKLTHLQTLSNFVLGKSGIRELMMLSNLQGILSVSRLEHVTDTREAVEAMLNKKVGIDVLKLKWSCCLNDESHIRRENDVLQMLQPHKTLTKLTVRCYGGISFPKWIGDPSFKSLVFLKLRDCANCTTLPILGNLHALRDLYIIGMKEVCCIDGGFYGDGCLRPFPSLERLHFMDMENWENWFPSGNNEQSDIFSSLQQLFIVKCPKLLGKLPENLPSLKYLLVKECERLMVTLSNLPLLCKLEVEGCKGLVLNCTTEFMSLNSMAISSISELTSLREGLVQGFKRVEKLKIVNCALDEIVLADWWGNEVWSEKHPHGLSSMLRSIEIRNFSVMRFIPKALMFNSHFLERLCICNCDSLVFVTTDQLPPTLKSLEISNCKNLQCLLDNGECSSSTITMQEDNNQNSGTSISHLEYIYIGWCPSLTCISRSGELPEAVKLLFIWNCSELTCLSMKGQLPKNLEKLEIQCCPMLDSIASTMHGNTSLESVQIWNCENLKSLPDGLHCLVNLKQIKIIGCPSLVSFPEEGFPTSCLTELCIMSCEKLEALPNCMHDLKSLKELEIGYCPSIQYVPEEGFPANLTSLWINDHNAWEAMFNWGLYKFTFLRDLTIIGVSMHMPLEELGTMLPSSLTSLTIQGFPQLKYMSSKGFHNLTSLSSLALRDLVNLTSLPSLGFDYLTSLEELSIYNCPKIFCLPKKGLPSSLLELYIQDCPLLKQQCMKDKGNDWSKIVDIPYVEIDGKFIYDSDDEY 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi618g00012 1423 SUPERFAMILY L domain-like 1086 1389 - -
Gabi618g00012 1423 PANTHER DISEASE RESISTANCE PROTEIN RP 51 847 IPR044974 GO:0006952
Gabi618g00012 1423 PRINTS Disease resistance protein signature 272 286 - -
Gabi618g00012 1423 PRINTS Disease resistance protein signature 369 383 - -
Gabi618g00012 1423 PRINTS Disease resistance protein signature 199 214 - -
Gabi618g00012 1423 PRINTS Disease resistance protein signature 888 904 - -
Gabi618g00012 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 431 IPR027417 -
Gabi618g00012 1423 Gene3D - 332 421 IPR042197 -
Gabi618g00012 1423 Pfam Rx N-terminal domain 7 99 IPR041118 -
Gabi618g00012 1423 FunFam Probable disease resistance protein At1g61300 155 327 - -
Gabi618g00012 1423 Gene3D Ribonuclease Inhibitor 927 1201 IPR032675 -
Gabi618g00012 1423 SUPERFAMILY L domain-like 491 966 - -
Gabi618g00012 1423 Gene3D - 422 501 IPR036388 -
Gabi618g00012 1423 Gene3D - 157 327 IPR027417 -
Gabi618g00012 1423 FunFam Probable disease resistance protein At1g63360 417 501 - -
Gabi618g00012 1423 Pfam NB-ARC domain 176 417 IPR002182 GO:0043531
Gabi618g00012 1423 CDD RX-CC_like 37 135 IPR038005 -
Gabi618g00012 1423 Gene3D Ribonuclease Inhibitor 1203 1402 IPR032675 -
Gabi618g00012 1423 Gene3D Ribonuclease Inhibitor 543 926 IPR032675 -
Gabi618g00012 1423 Gene3D - 12 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi618g00012 Gabi-Chr618 161514 165785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi618g00012 197 828 WRKY Transcription Factor Family AT5G45050 23.971 9.30e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi618g00012 - - ccaj:109818945 1793.48