Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi609g00006 ATGTGCATTGGAATTGAACTGTATGAAATGCAATATGGCCGCGATTTGGCCACAAATGCGATCGCAATAGCTGCTATTGTGTTCCGGGGCGGCGCAGTCTCTTGCGGCGACGCACCACAACGCCCATACGGCGCAGCTCACGGTGCTATTGCGGCGCTATTAACTACTATCGATAATGAAGTTGAATGCTGTTCATATTTCAATACAGGTTTTATTCTTGACCCTGCAAAATGTGGTGAGCTGAATTTGCAAGACAAGCAAAGGCTAGTCCATGAGATTGCTAGAGTATCAAAAGATGCCCCAAATATGCTTCAATCCTTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATAATAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCCAAGAAATCCAATTTGCACATCATCCAAAATACTCCTACCAATTCTCCTGCCAATAGTTGCATTGGATCTAAAAGGAAAAGAGGACCTCCATCTCATGATTTACATCATGCTCCTCTCGGGAGCAGTAAAGAGGAAACAGTGAAAATCACATTGTGTCAGAACGTAGCATGCAGAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATTGTTATGACGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCATGCCATTTGCAATGTGCCTTGAATAATCAAATTTCTGGTATTTTGAAGGGCAGTTGCGGAATAAAGTTGGATGGAAGCTTCTATTGTGTTTCTTGTGGAAAAATTAATGAACTAATGAGGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTGGATATACTTTCTTTGCGAATATTTTTGGCCCACAAAATTCTTGTAGGAACGGAAGTCTACAAGGAAGTGCAGAAGATTGTAGAATCTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCAAGGATGACACGTGGAATTGTGAGCAGGCTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCCACTGCAGTTGAATGTTTTGATTCAAAGTTTTCTGACCTCTTCTCTAATTGTGTGGAAAAGAAAGATGCAGCAACATGCTCTATACGTTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTAGAATACAAAGATAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACCGAATATCAACAACGGACTACCCTGAACAACCCACCTTCATTGTTTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTCTTCAGCAGCACAGGGATTTTGGGTGCAGCAGAAGCTAAATGGGTGACACCTTATGAACCCACAATTTCTCCTTCAAAAGACCAAATTAAGATAACTACTGAAAATCATCAGGTAGAATCTCTCAACTCTGACATAAAGTTATCATCTGGAGACCATCCTGCAAAAGACCTCTTTTTGAACATCAGGGGCAGGTTTGAAGAATTCCTCACCAAGCCTCCATCAGTCGAACTTTTTTCATATAGAAATTTTGCTGCGGTTTCACCTTCCACACCTTCTAAACCCAATGAAATGAGGCAATTTACTGGATTGAGTTCTAGAAAGCAATTGCAGGAAAATGATTACGAGTATTCTGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGACACATAGATGAAATCTTCAGAGTAAAATTTCTCACTTGGTTCAGCCTCAAGGCTACACAGCAGGAGAGAAGGGTTGTTAGTGCTTTTGTTGATGCGTTGATTGATGACCCAGCAAGCTTGGCGGACCAGCTCATACACACTTTCACCGACGAGATATATTGCGAGCAAAAACCTTAG 1962 0.4144 MCIGIELYEMQYGRDLATNAIAIAAIVFRGGAVSCGDAPQRPYGAAHGAIAALLTTIDNEVECCSYFNTGFILDPAKCGELNLQDKQRLVHEIARVSKDAPNMLQSFTRRELLEIICAELGKERKYTGYNKSQMIEHLLKIISKKSNLHIIQNTPTNSPANSCIGSKRKRGPPSHDLHHAPLGSSKEETVKITLCQNVACRATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALNNQISGILKGSCGIKLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDILSLRIFLAHKILVGTEVYKEVQKIVESALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVECFDSKFSDLFSNCVEKKDAATCSIRFEECLPTSVVIVLEYKDKLLKNFLGCRLWHRISTTDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPYEPTISPSKDQIKITTENHQVESLNSDIKLSSGDHPAKDLFLNIRGRFEEFLTKPPSVELFSYRNFAAVSPSTPSKPNEMRQFTGLSSRKQLQENDYEYSVRVVKWLEHQGHIDEIFRVKFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFTDEIYCEQKP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi609g00006 653 MobiDBLite consensus disorder prediction 154 182 - -
Gabi609g00006 653 CDD PHD_VIN3_plant 215 279 - -
Gabi609g00006 653 Pfam PHD - plant homeodomain finger protein 195 313 IPR032881 -
Gabi609g00006 653 PANTHER VIN3-LIKE PROTEIN 2-RELATED 71 503 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi609g00006 Gabi-Chr609 131851 135802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi609g00006 65 647 PHD Gene Family AT5G57380 34.244 1.05e-102 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi609g00006 - - gmx:100785502 983.786