Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00201 ATGCGAAATCCGAAGATGGAGGAGGAAGAGCACGAGGTGTACGGAGCAGAGATCCCAGACGTCGGAGAGATGGAAGGAGACGTGGACATGTCCGCCGCCGACGATGACGCCGCCGTGAAAGAGCTCGACGAGATGAAGCGGCGCTTGAAGGAAATGGAAGAGGAAGCCGCCGCACTTCGTGAGATGCAAGCCAAGGTCGAGAAGGAGATTGGCTCTGTTCAAGATCCTGCCGGTGCAGCTGCTTCTCAGGCAAACAAGGAGGAGACAGATTCTCGGTCTGTTTTCGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAATCATGTGGTACAGTGAACAGGGTCACTATCCTGACAGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTATTGAAACTGAAGCTGTTCAAGAGGCTATCTTGTTGAACGAATCTGAATTGCACGGCCGTCAATTGAAGGTTATGCCTAAGAGGACCAATGTTCCTGGAATGAAGCAATATCGACCTAGGCGCTTTAATCCTTATATGGCATATGGCTTCAGGAGGCCATATACTCCTCCTCACTTTTACTCCCCCTATGGATATGGGAAGGTACCTAGGTTTAGAAGGGCATCTCGTTACATGCCCTACTATTAG 663 0.4932 MRNPKMEEEEHEVYGAEIPDVGEMEGDVDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPAGAAASQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFIETEAVQEAILLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPHFYSPYGYGKVPRFRRASRYMPYY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00201 220 MobiDBLite consensus disorder prediction 68 91 - -
Gabi606g00201 220 MobiDBLite consensus disorder prediction 1 22 - -
Gabi606g00201 220 CDD RRM_II_PABPs 93 163 - -
Gabi606g00201 220 Gene3D - 20 175 IPR012677 -
Gabi606g00201 220 SMART rrm1_1 93 164 IPR000504 GO:0003723
Gabi606g00201 220 MobiDBLite consensus disorder prediction 1 18 - -
Gabi606g00201 220 Coils Coil 35 69 - -
Gabi606g00201 220 SUPERFAMILY RNA-binding domain, RBD 83 188 IPR035979 GO:0003676
Gabi606g00201 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 168 IPR000504 GO:0003723
Gabi606g00201 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 8 177 - -
Gabi606g00201 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 162 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00201 Gabi-Chr606 1657390 1661447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00201 93 163 Eukaryotic Initiation Factors Gene Family AT2G36660 34.722 3.56e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00201 K14396 - gmx:100789721 387.882