Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00144 ATGACTCAGCAGAATGTGGTAGTGTCCGAGACGAAATCTGGGATCAACTGGGCTATAACTGCTGCACAAAAGCCACCGGCGGGGCCAGGTGGGTACATTCTCATTCCAAGGAGGAGGATTTTGAAGAACCTTGAAATCAATGGAGGACAAAGAATCAATGCATGGATTGACTCCATGAAAGCCTCTTCTCCAACCCATGTCAAATCCACTCCTTCTTTGGCCGAAGAACAAAACTCTTGGATTCTTCGCCACCCATCAGCATTAGACATGTTTGAGGAAATTATGGATTCATCGAAGGGAAAGAAAATTGTAATCTTCCTAGACTACGATGGTACCTTGTCGCCTATAGTAGAGGACCCCGACCGTGCTTTCATGTCGGATTCGATGAGAAAAACAGTAAGGAAACTCGCAAGGTGTTTTCCCACTGCAATAGTTAGCGGCAGAAGCAGAGACAAGGTATACAATTTTGTTCGCCTGGCAGAGCTATATTATGCTGGAAGCCATGGTATGGATATTAAAGGCCCAACAAGAAGCTCAAAATACAACAAAAACAATAAAGCAGAGGCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATAGATGAGGTGTACCAACAATTAGTTGAGAAAACGAAATCAACTCCTGGAGCCAGGGTCGAGAACAACAAGTTCTGCGTGTCTGTTCATTTTCGCTGCGTCGATGAAAAGAAATGGAGTGAACTGGCACACCAAGTGAGATCAGTGTTAAAGGAATACCCGAAGCTTCGTCTTAGCCAAGGAAGAAAGGTACTAGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAGGCCCTGGAATTTTTGTTAGAGTCACTCGGATTTGCCAACTGTAATGATGTCTTTCCTGTTTATATTGGTGATGACAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGTATTCTTGTCTCGAAATTTCCGAAGGAAACAACTGCATCATACTCTTTACAGGAACCCAATGAGGTTATGGACTTCCTTCAACGTTTGGTGGAGTGGAAACAAGTATCCCTGCGAGCACGTTCCTGGGTGTAA 1095 0.4384 MTQQNVVVSETKSGINWAITAAQKPPAGPGGYILIPRRRILKNLEINGGQRINAWIDSMKASSPTHVKSTPSLAEEQNSWILRHPSALDMFEEIMDSSKGKKIVIFLDYDGTLSPIVEDPDRAFMSDSMRKTVRKLARCFPTAIVSGRSRDKVYNFVRLAELYYAGSHGMDIKGPTRSSKYNKNNKAEAVLFQPASEFLPMIDEVYQQLVEKTKSTPGARVENNKFCVSVHFRCVDEKKWSELAHQVRSVLKEYPKLRLSQGRKVLEIRPTIKWDKGKALEFLLESLGFANCNDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKETTASYSLQEPNEVMDFLQRLVEWKQVSLRARSWV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00144 364 FunFam Trehalose 6-phosphate phosphatase 103 190 - -
Gabi606g00144 364 Gene3D - 103 201 IPR023214 -
Gabi606g00144 364 Gene3D - 207 361 IPR023214 -
Gabi606g00144 364 CDD HAD_TPP 104 344 - -
Gabi606g00144 364 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 33 358 IPR044651 GO:0004805|GO:0005992
Gabi606g00144 364 SUPERFAMILY HAD-like 104 353 IPR036412 -
Gabi606g00144 364 NCBIfam HAD-IIB family hydrolase 105 316 IPR006379 -
Gabi606g00144 364 FunFam Trehalose 6-phosphate phosphatase 201 360 - -
Gabi606g00144 364 NCBIfam trehalose-phosphatase 100 351 IPR003337 GO:0003824|GO:0005992
Gabi606g00144 364 Pfam Trehalose-phosphatase 106 340 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00144 Gabi-Chr606 1348128 1350990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00144 99 350 Trehalose Biosynthesis Gene Families AT1G70290 26.568 2.41e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00144 K01087 - gmx:100794430 647.891