Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00131 ATGGCTTTGTCAGACATTGAGACATGCACAGTAGTTGATCCAGTGATGGAAACTGAGAAGACCACTCATGAAAGGTCTCAGTGGGTGGTCAATGCTCCTGATCCTCCAACTCTGAGGCATAAACTTGTTGGTTCTGTGAAGAACACCATTTCACAGAATCAAGCAAGGTGCCATTCTCTCAGAGGCCAACCCGTACCTAAAGTTGTGCTTTCCTTCTTGAAGGGCATTTTTCCTATTCTTGAGTGGGGCCAACATTATACAGTAACCAAATTCAGGAACGATTTACTTGCAGGTTTAACCATTGCTACTCTCTGCGTTCCTCAGAGCATTGGGTATGCCACTTTAGCAAAGCTTGATCCTGAATATGGCCTATATACAAGTGTTGTGCCACCTCTTATCTATGCTTTAATGGGAACCTCAAGAGAGATAGCAATTGGACCCGTGGCAGTGGTATCCCTTCTTTTGCCATCAATGATTCAGAAGTTAATAGACCCAGCTAATGATCCAATTGGTTACAGAAAACTTGTTTTCACTGCCACTTTGTTTGCTGGTTTATTTCAACTAGCGTTTGGACTCTTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCTCATGCTGCTATTGTTGGATTCATGGGGGGAGCGGCTATAATAATTGGTCTTCAACAGCTGAAGGGACTATTTGGGATCAATCATTTTACAAACGAAACAGACATAATCTCTGTCATGAAATCTGTTTGGGAATCATCTCATCATCCCTGGAACCCCCGCAATTTTGTCCTGGGATGTTCATTCCTCATTTTCATCCTGTTTACCAGATTTGTGGGTAAAAGGAATAAGAAACTGTTCTGGATGCCAGCAATATCCCCTCTAGTGTCAGTTTTGTTATCAACTCTTATAGTTTTTCTGACACGTGCGGACAAAAGTGGAGTTAATATTGTCAAACATATAAAAGGAGGACTAAATCCAAGCTCCATTAATCAGATACAGTTGCATAGCCCCCATGTTGGAGCATTGGCCAAAATTGGACTTCTTGTTGCTGTTGTTGCACTCACTGAATCGGTTGCCGTTGGCCGATCTTTTGCATCCATGAAAGGTTACCACCTTGATGGAAACAAGGAAATGTCATCATTAGGCTTCGTGAACATCATAGGATCCTTTACCTCTTGCTATGTTGCAACTGGTTCTTTCTCCCGCACAGTGGTAAATTTCACTGCCGGTTGTGAAACATTAGCGTCAAACATTGTGATGGCCATTACTGTCATCATATCACTGCAATGTTTCACGAAGCTATTGTATTTTACCCCAACTGCAATTCTTGCTTCAATAATCCTTTCAGCTCTCCCTGGACTTATAGACATCAACGAGGCCTACAAAATTTGGAAGGTTGATAAGGTTGATTTTCTTGCTTGCATTGGAGCTTTCTTTGGGGTGCTGTTTGCTTCAGTTGAGATTGGTCTGCTAGTGGCGGTGGCGATATCTTTTACAAAGATCATTTTAATCTCGATTGGAGCAGGCACAGAAAATCTGGGAAGACTTCCCGGCACAGATATATTCTGCGATGTTCATCAGTATCCTATGGCTGCTAAGACTCCCGGGGTAGTAATAATACGCATAAAGTCTTCATCACTTTGCTTCGCTAATGCCAATTCAATCAGAGAAAGGATCCTGAAGTGGATCATTCAGCAAGAAGCAGAGGGGAACAAGGAAGACCCCAGAAACATTATTCACCTCGTAATCCTTGACACCTCCAATTTGGTGAGCATTGACACCTCAGGCATTGCTTCTCTAGAAGAACTGCATAAGAGTTTGGTCTCAAGTGGGAAGAAGTTAGCAATTGTCAACCCAAGGTGGCAAGTGATTCACAAGCTAAAGGCTACAAACTTTGTCAAAACAATTGGAGGAAGGGTATTCTTGACTGTTGGAGAAGCTATTGACTGCAAGCTGGATTTCTAA 1953 0.4255 MALSDIETCTVVDPVMETEKTTHERSQWVVNAPDPPTLRHKLVGSVKNTISQNQARCHSLRGQPVPKVVLSFLKGIFPILEWGQHYTVTKFRNDLLAGLTIATLCVPQSIGYATLAKLDPEYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLLPSMIQKLIDPANDPIGYRKLVFTATLFAGLFQLAFGLFRLGFLVDFLSHAAIVGFMGGAAIIIGLQQLKGLFGINHFTNETDIISVMKSVWESSHHPWNPRNFVLGCSFLIFILFTRFVGKRNKKLFWMPAISPLVSVLLSTLIVFLTRADKSGVNIVKHIKGGLNPSSINQIQLHSPHVGALAKIGLLVAVVALTESVAVGRSFASMKGYHLDGNKEMSSLGFVNIIGSFTSCYVATGSFSRTVVNFTAGCETLASNIVMAITVIISLQCFTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKVDFLACIGAFFGVLFASVEIGLLVAVAISFTKIILISIGAGTENLGRLPGTDIFCDVHQYPMAAKTPGVVIIRIKSSSLCFANANSIRERILKWIIQQEAEGNKEDPRNIIHLVILDTSNLVSIDTSGIASLEELHKSLVSSGKKLAIVNPRWQVIHKLKATNFVKTIGGRVFLTVGEAIDCKLDF 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00131 650 Pfam STAS domain 524 643 IPR002645 -
Gabi606g00131 650 NCBIfam sulfate permease 78 636 IPR001902 GO:0016020|GO:0055085
Gabi606g00131 650 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Gabi606g00131 650 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Gabi606g00131 650 PANTHER SULFATE TRANSPORTER 51 645 IPR001902 GO:0016020|GO:0055085
Gabi606g00131 650 Gene3D STAS domain 505 647 IPR036513 -
Gabi606g00131 650 ProSiteProfiles STAS domain profile. 540 647 IPR002645 -
Gabi606g00131 650 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020
Gabi606g00131 650 FunFam Sulfate transporter 31 504 649 - -
Gabi606g00131 650 CDD STAS_SulP_like_sulfate_transporter 524 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00131 Gabi-Chr606 1126335 1132488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00131 24 646 Inorganic Solute Cotransporters AT5G10180 66.827 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00131 K17469 - gmx:100775538 1057.36