Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00113 ATGGCTCTCTCTGATCTCTTGGATCAGCTTTTCACCAAGACAATTGTCCTATTCACATACATGCTAATAGAACTTATCCTTTTCATTAGGTACCTAAAGTCAGATACACATCCAATTACCACCACCCAGTACCTCAATTTCATAGAAGAGAAGAACCCCACAATTTGCTACACCAGAAGACTGAAGCCAGAGCAGATAGAATGTAGGGTGTGCTTATCAGAATTCGAGGAAGGGGAGAAGGTAAGAAACTTGAATTGCAAACACACATTTCACAAGGATTGCTTGGACAAGTGGTTGCAGCAATATTGTGCTACATGCCCACTCTGCAGGAACAAAGTGTTGCCAGATGATGTTGTGTCCAAATATCAAAATCAGGTGGAATATGATGCGAATGATGACCACCTTATTTCTTTGTTATCTGCATTACGGGATGGTAGTTCTTTGCACAGATATCTATGA 459 0.4074 MALSDLLDQLFTKTIVLFTYMLIELILFIRYLKSDTHPITTTQYLNFIEEKNPTICYTRRLKPEQIECRVCLSEFEEGEKVRNLNCKHTFHKDCLDKWLQQYCATCPLCRNKVLPDDVVSKYQNQVEYDANDDHLISLLSALRDGSSLHRYL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00113 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 115 IPR013083 -
Gabi606g00113 152 SUPERFAMILY RING/U-box 46 116 - -
Gabi606g00113 152 PANTHER - 2 146 - -
Gabi606g00113 152 SMART ring_2 68 109 IPR001841 -
Gabi606g00113 152 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Gabi606g00113 152 Pfam Ring finger domain 67 110 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00113 Gabi-Chr606 1001109 1001567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00113 67 129 C3H Transcription Factor Family AT1G15100 55.556 3.06e-21 82.4